RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 CCDC3Q9BQI4 270 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 ZNF639Q9UID6 485 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 NDRG2Q9UN36 371 aaKnown RBP13.67□□□□□ -0.22
SREBF1-205ENST00000395757 JRKO75564 520 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 CSF2P04141 144 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 CD97P48960 835 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 CRISP1P54107 249 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 VEZF1Q14119 521 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 IRF4Q15306 451 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 PLEKHM3Q6ZWE6 761 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 OR9A2Q8NGT5 310 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 OR2L2Q8NH16 312 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 SUN5Q8TC36 379 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 WDR12Q9GZL7 423 aaKnown RBP13.67□□□□□ -0.22
SREBF1-205ENST00000395757 KLHL1Q9NR64 748 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 SPHK1Q9NYA1 384 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 EXO1Q9UQ84 846 aaKnown RBP13.67□□□□□ -0.22
SREBF1-205ENST00000395757 ZNF780BQ9Y6R6 833 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 TDRD6O60522 2096 aaKnown RBP13.67□□□□□ -0.22
SREBF1-205ENST00000395757 IL1RNP18510 177 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 ITIH1P19827 911 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 NT5EP21589 574 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 DDX6P26196 483 aaKnown RBP eCLIP13.67□□□□□ -0.221e-7■■■■■ 60
SREBF1-205ENST00000395757 RAB25P57735 213 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 TMEM240Q5SV17 173 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 FCRLBQ6BAA4 426 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 TBC1D19Q8N5T2 526 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 HMGB4Q8WW32 186 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 PATE1Q8WXA2 126 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 TREX2Q9BQ50 279 aaPredicted RBP13.67□□□□□ -0.22
SREBF1-205ENST00000395757 BEX2Q9BXY8 128 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 OR51V1Q9H2C8 321 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 DPEP2Q9H4A9 486 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 BRF2Q9HAW0 419 aa13.67□□□□□ -0.22
SREBF1-205ENST00000395757 EYSQ5T1H1 3165 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 CLCA1A8K7I4 914 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 SNPHO15079 494 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 SLC16A6O15403 523 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 CPNE6O95741 557 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 FHP07954 510 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 ENPP1P22413 925 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 UQCRC2P22695 453 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 GZMMP51124 257 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 CCR4P51679 360 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 MTAPQ13126 283 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 ZNF311Q5JNZ3 666 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 SLC16A12Q6ZSM3 486 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 PRSS58Q8IYP2 241 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 ANKK1Q8NFD2 765 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 C7orf34Q96L11 122 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 WFDC6Q9BQY6 131 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 DSN1Q9H410 356 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 COMMD3Q9UBI1 195 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 FAM183AA6NL82 134 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 PRKNO60260 465 aaPredicted RBP13.66□□□□□ -0.22
SREBF1-205ENST00000395757 NOS3P29474 1203 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 CTF1Q16619 201 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 C9orf50Q5SZB4 431 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 LACC1Q8IV20 430 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 OR4K5Q8NGD3 323 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 SRMSQ9H3Y6 488 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 EGLN3Q9H6Z9 239 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 FAIMQ9NVQ4 179 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 MRPS7Q9Y2R9 242 aaKnown RBP13.66□□□□□ -0.22
SREBF1-205ENST00000395757 ATG4BQ9Y4P1 393 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 HSD3B1P14060 373 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 HSD3B2P26439 372 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 GGT2P36268 569 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 CDKL4Q5MAI5 379 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 OR2G6Q5TZ20 316 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 FRMPD2BQ6IN97 320 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 POMZP3Q6PJE2 187 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 PRSS48Q7RTY5 328 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 PDZD3Q86UT5 571 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 GRAMD2AQ8IUY3 354 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 METTL4Q8N3J2 472 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 GRHL3Q8TE85 626 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 LRR1Q96L50 414 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 TSSK6Q9BXA6 273 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 MKRN2Q9H000 416 aaKnown RBP13.66□□□□□ -0.22
SREBF1-205ENST00000395757 SLC28A3Q9HAS3 691 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 ARID1AO14497 2285 aa13.66□□□□□ -0.22
SREBF1-205ENST00000395757 A0A1B0GVC2 190 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 A6NIN4 97 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 KMOO15229 486 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 UGDHO60701 494 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 FGF19O95750 216 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 SRPRAP08240 638 aaKnown RBP13.65□□□□□ -0.22
SREBF1-205ENST00000395757 IGFBP4P22692 258 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 SMU1Q2TAY7 513 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 CRTC2Q53ET0 693 aaPredicted RBP13.65□□□□□ -0.22
SREBF1-205ENST00000395757 FAM71E1Q6IPT2 247 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 SLC30A6Q6NXT4 461 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.65□□□□□ -0.22
SREBF1-205ENST00000395757 VRK2Q86Y07 508 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 KBTBD8Q8NFY9 601 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 PJA1Q8NG27 643 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 OR52E1Q8NGJ3 308 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 TEX47Q8TBZ9 253 aa13.65□□□□□ -0.22
SREBF1-205ENST00000395757 GATAD2BQ8WXI9 593 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms