RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 HOXC6P09630 235 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 PRR23D2P0DMB1 279 aaPredicted RBP11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 DRD2P14416 443 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 CNR2P34972 360 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 SULT1E1P49888 294 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 AFF1P51825 1210 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 TAS2R60P59551 318 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 OR2G6Q5TZ20 316 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 GDPGP1Q6ZNW5 385 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 ACOT1Q86TX2 421 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 ZNF614Q8N883 585 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 TMEM185AQ8NFB2 350 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 FXYD6Q9H0Q3 95 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 IMP3Q9NV31 184 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 FLRT1Q9NZU1 646 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 ZMYM5Q9UJ78 669 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 FZD10Q9ULW2 581 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 SHISA3A0PJX4 238 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 TNFRSF11BO00300 401 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 CACNG3O60359 315 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 KHDRBS3O75525 346 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 UROSP10746 265 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 PEPDP12955 493 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 ZNF8P17098 575 aaPredicted RBP11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 CSF2RBP32927 897 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 RORAP35398 523 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 OR1E2P47887 323 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 VEGFCP49767 419 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 CDH12P55289 794 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 HMGCS1Q01581 520 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 HTR4Q13639 388 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 KIAA0040Q15053 153 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 PTGES3Q15185 160 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 SPIN4Q56A73 249 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 MFSD14CQ5VZR4 134 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 VSIG10LQ86VR7 867 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 GPR135Q8IZ08 494 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 ARRDC1Q8N5I2 433 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 DENND6BQ8NEG7 585 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 MCPH1Q8NEM0 835 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 PXT1Q8NFP0 134 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 METTL6Q8TCB7 284 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 SMAD5Q99717 465 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 SOX7Q9BT81 388 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 MGAT4CQ9UBM8 478 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 ACSL6Q9UKU0 697 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 LOXHD1Q8IVV2 1947 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 A0A0U1RQF3 1178 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 C2orf92A0A1B0GVN3 265 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 LOC285095A0A1B0GVY8 99 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 LOC390937A0A1W2PQ73 354 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 URADA6NGE7 173 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 FAM220BPB1ANY3 271 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 CASC3O15234 703 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 TCAPO15273 167 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 FZD7O75084 574 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 GP1BAP07359 652 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 NFICP08651 508 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 IGFBP1P08833 259 aaPredicted RBP11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 CXCL8P10145 99 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 TXNP10599 105 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 S100A11P31949 105 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 NPBWR1P48145 328 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 UBE2IP63279 158 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 NFKB2Q00653 900 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 ECH1Q13011 328 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 C18orf21Q32NC0 220 aaPredicted RBP11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 SDHAF4Q5VUM1 108 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 TMUB2Q71RG4 321 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 SSX6Q7RTT6 188 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 TGIF2LXQ8IUE1 241 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 SPPL2AQ8TCT8 520 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 C11orf24Q96F05 449 aaPredicted RBP11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 TEX12Q9BXU0 123 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 DPY30Q9C005 99 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 AGO3Q9H9G7 860 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 SEBOXQ9HB31 216 aaPredicted RBP11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 CLN6Q9NWW5 311 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 FAM50BQ9Y247 325 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 MRPL11Q9Y3B7 192 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 COL11A2P13942 1736 aaPredicted RBP11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 C5orf52A6NGY3 159 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 FAM227AF5H4B4 570 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 ZNF593O00488 134 aaPredicted RBP11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 DVL2O14641 736 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 OPN1SWP03999 348 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 GABRA1P14867 456 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 ADCYAP1P18509 176 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 MATKP42679 507 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 CRKP46108 304 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 NR0B1P51843 470 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 RAB5BP61020 215 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 FABP5Q01469 135 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 PPIGQ13427 754 aaKnown RBP eCLIP11.91□□□□□ -0.59e-7■■■■■ 27.7
SLC28A1-203ENST00000394573 SLC5A12Q1EHB4 618 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 CPXCR1Q8N123 301 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 CRYBG2Q8N1P7 616 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 SETD7Q8WTS6 366 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 MOGAT1Q96PD6 335 aa11.91□□□□□ -0.5
SLC28A1-203ENST00000394573 HHIPQ96QV1 700 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms