RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 KNG1P01042 644 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 FASLGP48023 281 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 CDK6Q00534 326 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 FRG2Q64ET8 278 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 LYSMD3Q7Z3D4 306 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 CLEC10AQ8IUN9 316 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 FRG2BQ96QU4 278 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 UHRF1Q96T88 793 aaPredicted RBP12.89□□□□□ -0.35
USP49-203ENST00000394253 MYOCQ99972 504 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 AGXT2Q9BYV1 514 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 PSMD8P48556 350 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 ZNF630Q2M218 657 aaPredicted RBP12.89□□□□□ -0.35
USP49-203ENST00000394253 FUT10Q6P4F1 479 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 HIST2H3AQ71DI3 136 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 CDKN2AIPNLQ96HQ2 116 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 HBEGFQ99075 208 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 CENPOQ9BU64 300 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 PCDHA2Q9Y5H9 948 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 MRPL42Q9Y6G3 142 aaKnown RBP12.89□□□□□ -0.35
USP49-203ENST00000394253 INSIG1O15503 277 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 SOX14O95416 240 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 CDKN1CP49918 316 aaPredicted RBP12.89□□□□□ -0.35
USP49-203ENST00000394253 ZNF74Q16587 644 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 SLC35F1Q5T1Q4 408 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 SLC18B1Q6NT16 456 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 WRAP53Q9BUR4 548 aaKnown RBP12.89□□□□□ -0.35
USP49-203ENST00000394253 ACTL8Q9H568 366 aa12.89□□□□□ -0.35
USP49-203ENST00000394253 CPED1A4D0V7 1026 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 UPK1BO75841 260 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 FAM155BO75949 473 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 S100A8P05109 93 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 MS4A15Q8N5U1 240 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 C15orf54Q8N8G6 183 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 BANPQ8N9N5 519 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 OR4K1Q8NGD4 311 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 SFXN5Q8TD22 340 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 C10orf82Q8WW14 230 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 ARSGQ96EG1 525 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 ACOT13Q9NPJ3 140 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 PRDM9Q9NQV7 894 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 TAS2R14Q9NYV8 317 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 COQ3Q9NZJ6 369 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 EXO1Q9UQ84 846 aaKnown RBP12.88□□□□□ -0.35
USP49-203ENST00000394253 C17orf112F2Z3M2 114 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 POP4O95707 220 aaKnown RBP12.88□□□□□ -0.35
USP49-203ENST00000394253 MARCKSL1P49006 195 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 DBPQ10586 325 aaPredicted RBP12.88□□□□□ -0.35
USP49-203ENST00000394253 PAN3Q58A45 887 aaKnown RBP12.88□□□□□ -0.35
USP49-203ENST00000394253 ANKS1BQ7Z6G8 1248 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 PRR22Q8IZ63 422 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 INPP4AQ96PE3 977 aaPredicted RBP12.88□□□□□ -0.35
USP49-203ENST00000394253 POLDIP3Q9BY77 421 aaKnown RBP12.88□□□□□ -0.35
USP49-203ENST00000394253 DEFB129Q9H1M3 183 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 TMEM39AQ9NV64 488 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 TMEM2Q9UHN6 1383 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 OC90Q02509 493 aaPredicted RBP12.88□□□□□ -0.35
USP49-203ENST00000394253 ACY1Q03154 408 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 TNK1Q13470 666 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 GAS6Q14393 721 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 ZNF558Q96NG5 402 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 SCO1O75880 301 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 STAG3L2P0CL84 134 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 MAKP20794 623 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 PRKCZQ05513 592 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 SLAMF1Q13291 335 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 MSMO1Q15800 293 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 SERPINA9Q86WD7 417 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 OR51G2Q8NGK0 314 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 PTPN18Q99952 460 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 OXSMQ9NWU1 459 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 ROBO3Q96MS0 1386 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 KIAA1210Q9ULL0 1709 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 BCKDHBP21953 392 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 ERVK-21P61565 698 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 IL12RB2Q99665 862 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 AKAP11Q9UKA4 1901 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 WNK2Q9Y3S1 2297 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 C9JVG2 144 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 ZNF701M0R085 212 aaPredicted RBP12.88□□□□□ -0.35
USP49-203ENST00000394253 SAP18O00422 153 aaKnown RBP12.88□□□□□ -0.35
USP49-203ENST00000394253 MED6O75586 246 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 CKMT2P17540 419 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 RHCEP18577 417 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 SMAD3P84022 425 aaKnown RBP12.88□□□□□ -0.35
USP49-203ENST00000394253 ARHGAP1Q07960 439 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 LRRC52Q8N7C0 313 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 OR9A4Q8NGU2 314 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 OR51Q1Q8NH59 317 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 SHC3Q92529 594 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 ABHD16BQ9H3Z7 469 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 IGFLR1Q9H665 355 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 GGT3PA6NGU5 568 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 FAAHO00519 579 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 GGT2P36268 569 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 ARSFP54793 590 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 ABHD18Q0P651 414 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 OTOP1Q7RTM1 612 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 C6orf120Q7Z4R8 191 aa12.88□□□□□ -0.35
USP49-203ENST00000394253 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.88□□□□□ -0.35
USP49-203ENST00000394253 OR51J1Q9H342 316 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms