RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 ERVK-18Q9QC07 812 aa5.9□□□□□ -1.46
TRAV35-201ENST00000390462 NSG2Q9Y328 171 aa5.9□□□□□ -1.46
TRAV35-201ENST00000390462 TSC22D4Q9Y3Q8 395 aa5.9□□□□□ -1.46
TRAV35-201ENST00000390462 KLF2Q9Y5W3 355 aaPredicted RBP5.9□□□□□ -1.46
TRAV35-201ENST00000390462 RNF215Q9Y6U7 377 aa5.9□□□□□ -1.46
TRAV35-201ENST00000390462 CRB1P82279 1406 aa5.9□□□□□ -1.47
TRAV35-201ENST00000390462 A0A1W2PPC1 479 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 NPEPPSL1A6NEC2 478 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 SNTNA6NMZ2 147 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 A6NNC1 897 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 GABRR3A8MPY1 467 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 J3KR12 359 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 ETV2O00321 342 aaPredicted RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 RRP8O43159 456 aaKnown RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 KRT36O76013 467 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 DFFBO76075 338 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 BMP10O95393 424 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 TXNDC12O95881 172 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 ANXA4P09525 319 aaPredicted RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 CYP19A1P11511 503 aaPredicted RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 HPGDP15428 266 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 SRMP19623 302 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 NT5EP21589 574 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 TUBG1P23258 451 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 SFTPDP35247 375 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 OR3A3P47888 321 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 KCNJ4P48050 445 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 PGGT1BP53609 377 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 NOP14P78316 857 aaKnown RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 XIAPP98170 497 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 SLC20A2Q08357 652 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 MERTKQ12866 999 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 EXOSC2Q13868 293 aaKnown RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 HEPACAMQ14CZ8 416 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 PHKG1Q16816 387 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 FAM83EQ2M2I3 478 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 TMEM44Q2T9K0 475 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 MIDNQ504T8 468 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 XKR7Q5GH72 579 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 OR4A47Q6IF82 309 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 WASH2PQ6VEQ5 465 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 Q6ZNX1 250 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 KCTD8Q6ZWB6 473 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 VPS36Q86VN1 386 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 MAP7D3Q8IWC1 876 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 PRSS35Q8N3Z0 413 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 CPSF7Q8N684 471 aaKnown RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 SYT14Q8NB59 555 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 RNF149Q8NC42 400 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 DDHD1Q8NEL9 900 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 BHLHE22Q8NFJ8 381 aaPredicted RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 OR10Q1Q8NGQ4 319 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 GRHL3Q8TE85 626 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 C17orf50Q8WW18 174 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 IRGQQ8WZA9 623 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 RPL3LQ92901 407 aaKnown RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 EME1Q96AY2 570 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 ZBED3Q96IU2 234 aaPredicted RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 RBM41Q96IZ5 413 aaKnown RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 FAM84BQ96KN1 310 aaPredicted RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 BBC3Q96PG8 261 aaPredicted RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 UBAC1Q9BSL1 405 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 SLITRK6Q9H5Y7 841 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 RAB18Q9NP72 206 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 TUBG2Q9NRH3 451 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 PIPOXQ9P0Z9 390 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 LCMT1Q9UIC8 334 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 ERRFI1Q9UJM3 462 aaPredicted RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 ZNF346Q9UL40 294 aaKnown RBP5.89□□□□□ -1.47
TRAV35-201ENST00000390462 TNS2Q63HR2 1409 aa5.89□□□□□ -1.47
TRAV35-201ENST00000390462 TRPM1Q7Z4N2 1603 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 CICQ96RK0 1608 aaPredicted RBP5.88□□□□□ -1.47
TRAV35-201ENST00000390462 LY75O60449 1722 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 KIAA1210Q9ULL0 1709 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 TRAV25A0A0B4J276 109 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 CENPVL1A0A0U1RR11 272 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 ERICH2A1L162 156 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 PRR32B1ATL7 298 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 NPIPB6E9PJ23 425 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 ARPC1BO15143 372 aaKnown RBP5.88□□□□□ -1.47
TRAV35-201ENST00000390462 ARPC2O15144 300 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 RNF8O76064 485 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 PAPSS2O95340 614 aaPredicted RBP5.88□□□□□ -1.47
TRAV35-201ENST00000390462 ANP32DO95626 131 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 KRT19P08727 400 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 EZRP15311 586 aaKnown RBP5.88□□□□□ -1.47
TRAV35-201ENST00000390462 CYP11B1P15538 503 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 PSMA2P25787 234 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 CYLC1P35663 651 aaPredicted RBP5.88□□□□□ -1.47
TRAV35-201ENST00000390462 MPLP40238 635 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 ALDH3B1P43353 468 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 RPS5P46782 204 aaKnown RBP5.88□□□□□ -1.47
TRAV35-201ENST00000390462 LIMK2P53671 638 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 HSF1Q00613 529 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 KLC1Q07866 573 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 SYPL1Q16563 259 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 PARP6Q2NL67 630 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 VMACQ2NL98 169 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 HNRNPA1L2Q32P51 320 aaKnown RBP5.88□□□□□ -1.47
TRAV35-201ENST00000390462 SLC9C1Q4G0N8 1177 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms