RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 ST13P4Q8IZP2 240 aaPredicted RBP16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 FBXO36Q8NEA4 188 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 TANKQ92844 425 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 ABTB1Q969K4 478 aaPredicted RBP16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 ARSGQ96EG1 525 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 RHOJQ9H4E5 214 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 GALNT8Q9NY28 637 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 PHF11Q9UIL8 331 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 RNF112Q9ULX5 631 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 C15orf41Q9Y2V0 281 aa16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 MTO1Q9Y2Z2 717 aaKnown RBP16.26■□□□□ 0.19
PDLIM4-202ENST00000379018 C2orf92A0A1B0GVN3 265 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 SH3D21A4FU49 640 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 ARHGEF9O43307 516 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 SCELO95171 688 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 GGT5P36269 586 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 GMPRP36959 345 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 BUD31P41223 144 aaPredicted RBP16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 SLC37A1P57057 533 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 FOXF2Q12947 444 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 PDIA2Q13087 525 aaKnown RBP16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 MORF4L2Q15014 288 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 TBCELQ5QJ74 424 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 SYDE1Q6ZW31 735 aaPredicted RBP16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 CIARTQ8N365 385 aaPredicted RBP16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 SPPL2AQ8TCT8 520 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 ACTRT1Q8TDG2 376 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 ZNF592Q92610 1267 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 UBE2E3Q969T4 207 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 CMTM7Q96FZ5 175 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 WDYHV1Q96HA8 205 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 TRIM31Q9BZY9 425 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 MS4A12Q9NXJ0 267 aa16.25■□□□□ 0.19
PDLIM4-202ENST00000379018 MBD3L4A6NDZ8 208 aaPredicted RBP16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 MBD3L3A6NE82 208 aaPredicted RBP16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 MBD3L5A6NJ08 208 aaPredicted RBP16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 CD8B2A6NJW9 211 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 CAPN14A8MX76 684 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 CASKO14936 926 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 CLPSP04118 112 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 HPNP05981 417 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 CYP4B1P13584 511 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 CD1DP15813 335 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 IVDP26440 423 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 CPOXP36551 454 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 LRRC70Q7Z2Q7 622 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 KLHL7Q8IXQ5 586 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 C7orf57Q8NEG2 295 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 OR7G3Q8NG95 312 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 MBD3L2Q8NHZ7 208 aaPredicted RBP16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 SLC44A1Q8WWI5 657 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 UCN3Q969E3 161 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 RGMAQ96B86 450 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 Q96MF0 132 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 MTERF1Q99551 399 aaKnown RBP16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 PELOQ9BRX2 385 aaKnown RBP16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 CENPKQ9BS16 269 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 REPIN1Q9BWE0 567 aaKnown RBP16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 UBQLN3Q9H347 655 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 POPDC3Q9HBV1 291 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 PTBP2Q9UKA9 531 aaKnown RBP16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 EIF3LQ9Y262 564 aaKnown RBP16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 NPFFR2Q9Y5X5 522 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 RTTNQ86VV8 2226 aa16.24■□□□□ 0.19
PDLIM4-202ENST00000379018 TLN2Q9Y4G6 2542 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 CSPG4Q6UVK1 2322 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 A0A1W2PS29 197 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 OR6C76A6NM76 312 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 FAM171A2A8MVW0 826 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 SUPT3HB4E1H0 165 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 H0Y3Z8 333 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 PLPP1O14494 284 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 SMPD2O60906 423 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 SUPT3HO75486 399 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 GPR75O95800 540 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 NR2F6P10588 404 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 KRT15P19012 456 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 SOX18P35713 384 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 SLCO1A2P46721 670 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 POU4F1Q01851 419 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 SETDB1Q15047 1291 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 TBCCQ15814 346 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 NNATQ16517 81 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 SPRED3Q2MJR0 410 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 DEPDC1Q5TB30 811 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 FNDC7Q5VTL7 733 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 ANGPTL8Q6UXH0 198 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 CXorf67Q86X51 503 aaPredicted RBP16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 LAS2Q8IYD9 372 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 GCNT2Q8N0V5 402 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 SLC35F6Q8N357 371 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 PDPRQ8NCN5 879 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 FAM83FQ8NEG4 500 aaPredicted RBP16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 HUS1BQ8NHY5 278 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 RDH11Q8TC12 318 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 INTS12Q96CB8 462 aaKnown RBP16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 LRRC39Q96DD0 335 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 TSPAN17Q96FV3 270 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 CD244Q9BZW8 370 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 METTL7AQ9H8H3 244 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms