RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 TRIM45Q9H8W5 580 aaPredicted RBP15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 NMNAT1Q9HAN9 279 aaPredicted RBP15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 HCFC1R1Q9NWW0 138 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 MAT2BQ9NZL9 334 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 KIAA1671Q9BY89 1806 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 TRIM3O75382 744 aaPredicted RBP15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 LGI1O95970 557 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 CHRM5P08912 532 aaPredicted RBP15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 MSL3P1P0C860 447 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 WEE1P30291 646 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 XCR1P46094 333 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 HMGA2P52926 109 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 C1DQ13901 141 aaKnown RBP15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 MEDAGQ5VYS4 303 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 C22orf42Q6IC83 251 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 HSDL2Q6YN16 418 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 IDO2Q6ZQW0 420 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 TECPR1Q7Z6L1 1165 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 MMP21Q8N119 569 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 OXR1Q8N573 874 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 CLDN22Q8N7P3 220 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 NANOGP1Q8N7R0 232 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 ZNF366Q8N895 744 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 GEMIN6Q8WXD5 167 aaKnown RBP15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 HDHD5Q9BXW7 423 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 FZD3Q9NPG1 666 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 CLCA3PQ9Y6N3 262 aa15.76■□□□□ 0.11
PCDHA1-201ENST00000378133 SMIM30A4D0T7 59 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 C8AP07357 584 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 LIMS1P48059 325 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 MAN2A2P49641 1150 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 MNX1P50219 401 aaPredicted RBP15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 GRIN2CQ14957 1233 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 LEXMQ3ZCV2 418 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 CRB2Q5IJ48 1285 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 PAQR6Q6TCH4 344 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 GLRX5Q86SX6 157 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 LAS2Q8IYD9 372 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 TAGAPQ8N103 731 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 ZNF740Q8NDX6 193 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 FAM83CQ9BQN1 747 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 WRAP53Q9BUR4 548 aaKnown RBP15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 DMRT3Q9NQL9 472 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 COL4A6Q14031 1691 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 A0A1W2PRB8 838 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 TRBC2A0A5B9 178 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 PIPSLA2A3N6 862 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 LEUTXA8MZ59 168 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 FAM227AF5H4B4 570 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 SHOXO15266 292 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 CCL16O15467 120 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 TSPAN9O75954 239 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 C1GALT1C1LP0DN25 315 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 AP2S1P53680 142 aaPredicted RBP15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 MLLT11Q13015 90 aaPredicted RBP15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 TRIQKQ629K1 86 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 LAMTOR1Q6IAA8 161 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 PROKR2Q8NFJ6 384 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 IRF7Q92985 503 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 ZNF689Q96CS4 500 aaPredicted RBP15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 GTPBP2Q9BX10 602 aaKnown RBP15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 SORBS1Q9BX66 1292 aaKnown RBP15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 NARFLQ9H6Q4 476 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 ZMAT5Q9UDW3 170 aaKnown RBP15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 TMCC3Q9ULS5 477 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 DYRK1BQ9Y463 629 aa15.75■□□□□ 0.11
PCDHA1-201ENST00000378133 MYL12BO14950 172 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 SLC2A2P11168 524 aaPredicted RBP15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 APEX1P27695 318 aaKnown RBP15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 SDC2P34741 201 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 SLC9A3P48764 834 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 DEFB103AP81534 67 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 FAM71E1Q6IPT2 247 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 MZT2BQ6NZ67 158 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 USP30Q70CQ3 517 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 KIAA1143Q96AT1 154 aaPredicted RBP15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 NELL2Q99435 816 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 RBFOX1Q9NWB1 397 aaKnown RBP15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 PCDH10Q9P2E7 1040 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 NLKQ9UBE8 527 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 PLXNA2O75051 1894 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 FAM240BA0A1B0GVZ2 78 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 FOXE1O00358 373 aaPredicted RBP15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 PROM1O43490 865 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 LILRB3O75022 631 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 ELFN1P0C7U0 828 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 SNRPGP62308 76 aaKnown RBP15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 PDE7AQ13946 482 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 ZNF630Q2M218 657 aaPredicted RBP15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 LIPIQ6XZB0 460 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 SLC51BQ86UW2 128 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 OMA1Q96E52 524 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 TCEAL4Q96EI5 215 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 SLC6A16Q9GZN6 736 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 ANKRA2Q9H9E1 313 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 RPL36Q9Y3U8 105 aaKnown RBP15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 ENPP4Q9Y6X5 453 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 IFNA14P01570 189 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 PCBP3P57721 371 aaKnown RBP15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 ELOAQ14241 798 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms