RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 hCG_1807616A0A1W2PRN6 198 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 FTCDNL1E5RQL4 147 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 LHCGRP22888 699 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 CHRNB4P30926 498 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 POU6F2P78424 691 aaPredicted RBP10.33□□□□□ -0.76
HIF3A-205ENST00000377670 GSTM4Q03013 218 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 ZNF33BQ06732 778 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 DLX2Q07687 328 aaPredicted RBP10.33□□□□□ -0.76
HIF3A-205ENST00000377670 EXOC3L2Q2M3D2 409 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 DPY19L1Q2PZI1 675 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 TMEM201Q5SNT2 666 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 FRG2Q64ET8 278 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 OR2T5Q6IEZ7 315 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 TMEM173Q86WV6 379 aaPredicted RBP10.33□□□□□ -0.76
HIF3A-205ENST00000377670 SLC15A3Q8IY34 581 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 CNEP1R1Q8N9A8 125 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 OR4F6Q8NGB9 312 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 OR2T29Q8NH02 315 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 COQ8AQ8NI60 647 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 FRG2BQ96QU4 278 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 FUZQ9BT04 418 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 PBX4Q9BYU1 374 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 RPF2Q9H7B2 306 aaKnown RBP10.33□□□□□ -0.76
HIF3A-205ENST00000377670 MEAF6Q9HAF1 191 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 KIR2DS5A0A0G2JLQ3 304 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 A0A0G2JNG1 304 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 KIR2DS3K7RE56 304 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 DIRAS1O95057 198 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 RORAP35398 523 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 INHBCP55103 352 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 KIR2DS5Q14953 304 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 LAPTM4AQ15012 233 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 DEFB110Q30KQ9 67 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 LRIF1Q5T3J3 769 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 SNX29P2Q8IUI4 249 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 UMODL1-AS1Q8N2C9 162 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 OR5AK3PQ8NH89 298 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 CPNE2Q96FN4 548 aaPredicted RBP10.33□□□□□ -0.76
HIF3A-205ENST00000377670 CAMK1GQ96NX5 476 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 TTYH2Q9BSA4 534 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 ACTR3BQ9P1U1 418 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 TRAV6A0A075B6T7 132 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 CSTBP04080 98 aaKnown RBP10.33□□□□□ -0.76
HIF3A-205ENST00000377670 PIGFQ07326 219 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 MLC1Q15049 377 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 CRB2Q5IJ48 1285 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 C2CD4AQ8NCU7 369 aaPredicted RBP10.33□□□□□ -0.76
HIF3A-205ENST00000377670 CDH20Q9HBT6 801 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 RNF11Q9Y3C5 154 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 PCDHGB1Q9Y5G3 927 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 H7C2Y5 167 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 NARSO43776 548 aaKnown RBP10.33□□□□□ -0.76
HIF3A-205ENST00000377670 ENGP17813 658 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 ZNF81P51508 661 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 CDKN2DP55273 166 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 HNRNPA1L2Q32P51 320 aaKnown RBP10.33□□□□□ -0.76
HIF3A-205ENST00000377670 TRMT10AQ8TBZ6 339 aaKnown RBP10.33□□□□□ -0.76
HIF3A-205ENST00000377670 CCDC107Q8WV48 283 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 C14orf119Q9NWQ9 140 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 CAMK2AQ9UQM7 478 aa10.33□□□□□ -0.76
HIF3A-205ENST00000377670 XIRP1Q702N8 1843 aaKnown RBP10.33□□□□□ -0.76
HIF3A-205ENST00000377670 SLC35F4A4IF30 521 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 PENKP01210 267 aaPredicted RBP10.32□□□□□ -0.76
HIF3A-205ENST00000377670 LCN1P31025 176 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 RBM34P42696 430 aaKnown RBP10.32□□□□□ -0.76
HIF3A-205ENST00000377670 SLC6A11P48066 632 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 UFM1P61960 85 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 PTPRRQ15256 657 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 ZMYND11Q15326 602 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 PTCHD3Q3KNS1 767 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 FAM76BQ5HYJ3 339 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 ANKRD26P1Q6NSI1 321 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 GATSQ8NAP1 163 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 NAXEQ8NCW5 288 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 NINJ1Q92982 152 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 GAL3ST3Q96A11 431 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 BORCS8Q96FH0 119 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 FARSBQ9NSD9 589 aaKnown RBP10.32□□□□□ -0.76
HIF3A-205ENST00000377670 EBF1Q9UH73 591 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 FZD4Q9ULV1 537 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 MEMO1Q9Y316 297 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 A0A1B0GVT2 93 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 RNF13O43567 381 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 KCNC3Q14003 757 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 SCGB2B2Q4G0G5 96 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 SHQ1Q6PI26 577 aaKnown RBP10.32□□□□□ -0.76
HIF3A-205ENST00000377670 HAGHLQ6PII5 290 aaPredicted RBP10.32□□□□□ -0.76
HIF3A-205ENST00000377670 PLCZ1Q86YW0 608 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 SHKBP1Q8TBC3 707 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 AURKBQ96GD4 344 aaPredicted RBP10.32□□□□□ -0.76
HIF3A-205ENST00000377670 TSGA13Q96PP4 275 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 TMEM246Q9BRR3 403 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 OR51B5Q9H339 312 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 MAB21L2Q9Y586 359 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 ENTPD6O75354 484 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 SLITRK5O94991 958 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 HK1P19367 917 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 MAP2K4P45985 399 aa10.32□□□□□ -0.76
HIF3A-205ENST00000377670 NKX2-5P52952 324 aaPredicted RBP10.32□□□□□ -0.76
HIF3A-205ENST00000377670 TMBIM6P55061 237 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms