RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 CCDC116Q8IYX3 515 aa13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 TCEANCQ8N8B7 351 aa13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 OR2A1Q8NGT9 310 aa13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 DOK4Q8TEW6 326 aa13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 PPP1R14BQ96C90 147 aa13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 TRMT61AQ96FX7 289 aaKnown RBP13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 AMDHD1Q96NU7 426 aa13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 CAMK1GQ96NX5 476 aa13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 MGLLQ99685 303 aa13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 SLC6A20Q9NP91 592 aa13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 SCHIP1Q9P0W5 487 aaPredicted RBP13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 THAP10Q9P2Z0 257 aaPredicted RBP13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 ATG4BQ9Y4P1 393 aa13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 STON1Q9Y6Q2 735 aa13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 MDC1Q14676 2089 aaKnown RBP13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 DSPPQ9NZW4 1301 aa13.72□□□□□ -0.21
ZKSCAN4-201ENST00000377294 ATG2AQ2TAZ0 1938 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 A0A0A6YYD5 115 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 PNMA8CA0A1B0GUJ8 204 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 LRIT2A6NDA9 550 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 AGRPO00253 132 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 ERI3O43414 337 aaKnown RBP13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 GPX5O75715 221 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 SEMA3DO95025 777 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 H1F0P07305 194 aaKnown RBP13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 NR2F1P10589 423 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 CERS1P27544 350 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 PDGFRLQ15198 375 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 TPRG1LQ5T0D9 272 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 STEAP3Q658P3 488 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 KIAA1211LQ6NV74 962 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 PODNL1Q6PEZ8 512 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 TMEM107Q6UX40 140 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 USP43Q70EL4 1123 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 KIAA1958Q8N8K9 716 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 ZG16BQ96DA0 208 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 ZBED6CLQ96FA7 236 aaPredicted RBP13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 ZNF354BQ96LW1 612 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 MAPKAP1Q9BPZ7 522 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 RPP25Q9BUL9 199 aaKnown RBP13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 RERGLQ9H628 205 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 C6orf106Q9H6K1 298 aaPredicted RBP13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 ZNF229Q9UJW7 825 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 TMCC3Q9ULS5 477 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 A4GNTQ9UNA3 340 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 TSC22D4Q9Y3Q8 395 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 GPSM3Q9Y4H4 160 aa13.71□□□□□ -0.21
ZKSCAN4-201ENST00000377294 AGAP5A6NIR3 686 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 KMOO15229 486 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 TP53P04637 393 aaPredicted RBP13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 OSMP13725 252 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 PEBP1P30086 187 aaKnown RBP13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 FRKP42685 505 aaPredicted RBP13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 XKP51811 444 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 HOXC5Q00444 222 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 DBPQ10586 325 aaPredicted RBP13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 HYAL2Q12891 473 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 SLAMF1Q13291 335 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 GPM6BQ13491 265 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 ATCAYQ86WG3 371 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 LYSMD2Q8IV50 215 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 TMEM145Q8NBT3 493 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 FAM46DQ8NEK8 389 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 OR6T1Q8NGN1 323 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 GANCQ8TET4 914 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 OPALINQ96PE5 141 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 NEUROD4Q9HD90 331 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 CLN6Q9NWW5 311 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 TVP23BQ9NYZ1 205 aa13.71□□□□□ -0.22
ZKSCAN4-201ENST00000377294 TRBV23OR9-2A0A075B6M9 112 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 A0A1W2PR48 441 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 PDZK1P1A8MUH7 402 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 PRKYO43930 277 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 SSX4O60224 188 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 CNOT3O75175 753 aaKnown RBP13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 TIE1P35590 1138 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 BUD31P41223 144 aaPredicted RBP13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 PPP5CP53041 499 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 SFSWAPQ12872 951 aaKnown RBP13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 RUNX3Q13761 415 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 PLAG1Q6DJT9 500 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 IQCHQ86VS3 1027 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 SLC34A3Q8N130 599 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 PARP16Q8N5Y8 322 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 SIMC1Q8NDZ2 872 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 OR52E1Q8NGJ3 308 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 CNRIP1Q96F85 164 aaPredicted RBP13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 CNPPD1Q9BV87 410 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 TEX101Q9BY14 249 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 POLR2J3Q9H1A7 115 aaKnown RBP13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 EXOSC4Q9NPD3 245 aaKnown RBP13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 PRKAG2Q9UGJ0 569 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 CA5BQ9Y2D0 317 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 NTNG1Q9Y2I2 539 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 LAMA1P25391 3075 aa13.7□□□□□ -0.22
ZKSCAN4-201ENST00000377294 CTDSP2O14595 271 aa13.69□□□□□ -0.22
ZKSCAN4-201ENST00000377294 CSO75390 466 aaKnown RBP13.69□□□□□ -0.22
ZKSCAN4-201ENST00000377294 EML2O95834 649 aa13.69□□□□□ -0.22
ZKSCAN4-201ENST00000377294 CXCR2P25025 360 aa13.69□□□□□ -0.22
ZKSCAN4-201ENST00000377294 UGT2B10P36537 528 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms