RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 SLC1A7O00341 560 aa12.98□□□□□ -0.33
C9orf47-203ENST00000375851 RNF13O43567 381 aa12.98□□□□□ -0.33
C9orf47-203ENST00000375851 RABIFP47224 123 aa12.98□□□□□ -0.33
C9orf47-203ENST00000375851 ZNF41P51814 821 aaPredicted RBP12.98□□□□□ -0.33
C9orf47-203ENST00000375851 ERVFC1P60507 584 aa12.98□□□□□ -0.33
C9orf47-203ENST00000375851 CLEC14AQ86T13 490 aa12.98□□□□□ -0.33
C9orf47-203ENST00000375851 OR8H1Q8NGG4 311 aa12.98□□□□□ -0.33
C9orf47-203ENST00000375851 FRS2Q8WU20 508 aa12.98□□□□□ -0.33
C9orf47-203ENST00000375851 ZNF480Q8WV37 535 aa12.98□□□□□ -0.33
C9orf47-203ENST00000375851 TMEM234Q8WY98 164 aa12.98□□□□□ -0.33
C9orf47-203ENST00000375851 PEX11GQ96HA9 241 aa12.98□□□□□ -0.33
C9orf47-203ENST00000375851 LRR1Q96L50 414 aa12.98□□□□□ -0.33
C9orf47-203ENST00000375851 HSPA12BQ96MM6 686 aa12.98□□□□□ -0.33
C9orf47-203ENST00000375851 ZFYVE21Q9BQ24 234 aa12.98□□□□□ -0.33
C9orf47-203ENST00000375851 SCO2O43819 266 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 OXSR1O95747 527 aaPredicted RBP12.97□□□□□ -0.33
C9orf47-203ENST00000375851 CDK3Q00526 305 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 MGAT3Q09327 533 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 DEFB110Q30KQ9 67 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 LCTLQ6UWM7 567 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 RNF111Q6ZNA4 994 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 TSPYL5Q86VY4 417 aaPredicted RBP12.97□□□□□ -0.33
C9orf47-203ENST00000375851 TMIEQ8NEW7 156 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 MMP27Q9H306 513 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 HEBP1Q9NRV9 189 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 LAMP5Q9UJQ1 280 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 HS3ST2Q9Y278 367 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 C11orf98E9PRG8 122 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 TRAPPC6AO75865 159 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 HOXC13P31276 330 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 CAMK1Q14012 370 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 SPHARQ15513 63 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 ZNF367Q7RTV3 350 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 SLC22A16Q86VW1 577 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 ZNF101Q8IZC7 436 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 OR6N2Q8NGY6 317 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 THAP3Q8WTV1 239 aaPredicted RBP12.97□□□□□ -0.33
C9orf47-203ENST00000375851 NSMAFQ92636 917 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 LGALS12Q96DT0 336 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 HHIPL1Q96JK4 782 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 CHMP1AQ9HD42 196 aaPredicted RBP12.97□□□□□ -0.33
C9orf47-203ENST00000375851 BTNL2Q9UIR0 455 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 HYKKA2RU49 373 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 UNC119BA6NIH7 251 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 PRLP01236 227 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 DRD1P21728 446 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 CLDN2P57739 230 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 SNTA1Q13424 505 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 CLCA4Q14CN2 919 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 LRIT3Q3SXY7 679 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 SNX29P2Q8IUI4 249 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 SLITRK4Q8IW52 837 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 ADGRG5Q8IZF4 528 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 OR2A12Q8NGT7 310 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 PROKR1Q8TCW9 393 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 MR1Q95460 341 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 CMKLR1Q99788 373 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 PCDHGB5Q9Y5G0 923 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 EIF1AYO14602 144 aaKnown RBP12.97□□□□□ -0.33
C9orf47-203ENST00000375851 PPM1BO75688 479 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 ADAP00813 363 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 MYF6P23409 242 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 PLCXD2Q0VAA5 305 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 VEZF1Q14119 521 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 PNCKQ6P2M8 343 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 FBXO42Q6P3S6 717 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 PNLDC1Q8NA58 520 aaKnown RBP12.97□□□□□ -0.33
C9orf47-203ENST00000375851 OR5T3Q8NGG3 340 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 CIDECQ96AQ7 238 aaPredicted RBP12.97□□□□□ -0.33
C9orf47-203ENST00000375851 HAVCR1Q96D42 359 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 CITED4Q96RK1 184 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 MBD2Q9UBB5 411 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 TMA7Q9Y2S6 64 aaKnown RBP12.97□□□□□ -0.33
C9orf47-203ENST00000375851 MAST2Q6P0Q8 1798 aa12.97□□□□□ -0.33
C9orf47-203ENST00000375851 A0A1W2PRG6 482 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 WRBO00258 174 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 NDUFV2P19404 249 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 CRYZQ08257 329 aaKnown RBP12.96□□□□□ -0.33
C9orf47-203ENST00000375851 PMS2P3Q13401 168 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 GRM7Q14831 915 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 DEFB126Q9BYW3 111 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 CWH43Q9H720 699 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 HSPE1-MOB4S4R3N1 261 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 SCN9AQ15858 1988 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 A0A0G2JPF8 293 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 ANTXRLA6NF34 631 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 HNRNPCL3B7ZW38 293 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 ZNF217O75362 1048 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 HNRNPCL4P0DMR1 293 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 ITIH1P19827 911 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 IGFBP6P24592 240 aaPredicted RBP12.96□□□□□ -0.33
C9orf47-203ENST00000375851 SGSHP51688 502 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 CHAF1BQ13112 559 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 HNRNPA0Q13151 305 aaKnown RBP12.96□□□□□ -0.33
C9orf47-203ENST00000375851 ADAM15Q13444 863 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 RUNDC3AQ59EK9 446 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 TMEM236Q5W0B7 351 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 RPL13AP3Q6NVV1 102 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 OR2L2Q8NH16 312 aa12.96□□□□□ -0.33
C9orf47-203ENST00000375851 HS6ST2Q96MM7 605 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms