RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 COLEC11Q9BWP8 271 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 EVA1AQ9H8M9 152 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 MED31Q9Y3C7 131 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 OR2AG2A6NM03 316 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 OR12D2P58182 307 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 FAM216AQ8WUB2 273 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 ADORA2AP29274 412 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 CRISP1P54107 249 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 OTUD1Q5VV17 481 aaPredicted RBP6.35□□□□□ -1.39
UBR4-204ENST00000375254 CES4AQ5XG92 561 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 APCDD1Q8J025 514 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 LMNTD1Q8N9Z9 388 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 WDR48Q8TAF3 677 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 NEK7Q8TDX7 302 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 GLYATL2Q8WU03 294 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 ARMC5Q96C12 935 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 P2RY13Q9BPV8 354 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 TMEM100Q9NV29 134 aa6.35□□□□□ -1.39
UBR4-204ENST00000375254 K7EPK0 472 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 ADAM23O75077 832 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 MGMTP16455 207 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 GGT5P36269 586 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 OR1G1P47890 313 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 TBX4P57082 545 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 RNF44Q7L0R7 432 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 GDPD3Q7L5L3 318 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 UEVLDQ8IX04 471 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 FAM71E2Q8N5Q1 922 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 KCNMB3Q9NPA1 279 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 SDR39U1Q9NRG7 319 aaPredicted RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 MED14O60244 1454 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 ASTN1O14525 1302 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 GABARAPO95166 117 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 RAB6AP20340 208 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 RDH10Q8IZV5 341 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 ZNF610Q8N9Z0 462 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 OR13D1Q8NGV5 346 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 EXOSC8Q96B26 276 aaKnown RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 CSPG4P5Q96PW8 444 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 MMP19Q99542 508 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 SEMA4CQ9C0C4 833 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 KCNIP2Q9NS61 270 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 C2orf78A6NCI8 922 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 DIRAS3O95661 229 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 GOT2P00505 430 aaKnown RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 CEACAM7Q14002 265 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 SLC38A6Q8IZM9 456 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 OR6T1Q8NGN1 323 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 PHYHIPLQ96FC7 376 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 SCMH1Q96GD3 660 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 VCX2Q9H322 139 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 SOX17Q9H6I2 414 aaPredicted RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 OR2S2Q9NQN1 319 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 ZNF518AQ6AHZ1 1483 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 EPHB6O15197 1021 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 SNCGO76070 127 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 CPT2P23786 658 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 ZNF691Q5VV52 312 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 SLC35F5Q8WV83 523 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 HSH2DQ96JZ2 352 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 MACROD1Q9BQ69 325 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 NPIPA5A0A0B4J1W7 369 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 EBLN1P0CF75 366 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 EFCAB12Q6NXP0 572 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 C5orf46Q6UWT4 87 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 ZNF417Q8TAU3 575 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 CASTOR1Q8WTX7 329 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 RASD2Q96D21 266 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 SLC15A5A6NIM6 579 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 POU3F3P20264 500 aaPredicted RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 RAB11AP62491 216 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 ZNF266Q14584 549 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 LRIT3Q3SXY7 679 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 HSD17B13Q7Z5P4 300 aaPredicted RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 ZNF582Q96NG8 517 aaPredicted RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 STRAPQ9Y3F4 350 aaKnown RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 DLX3O60479 287 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 ABLIM3O94929 683 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 MATN4O95460 622 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 TCRBP04435 133 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 HTR1AP08908 422 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 PRKACGP22612 351 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 IMPA1P29218 277 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 CNTN2Q02246 1040 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 HAGHQ16775 308 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 LRRC37A5PQ49AS3 106 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 DCUN1D4Q92564 292 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 LRR1Q96L50 414 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 TMX2Q9Y320 296 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 PUS1Q9Y606 427 aaKnown RBP eCLIP6.34□□□□□ -1.39
UBR4-204ENST00000375254 ZNF207O43670 478 aaKnown RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 RHOCP08134 193 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 IGFBP1P08833 259 aaPredicted RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 ZNF26P17031 533 aaPredicted RBP6.34□□□□□ -1.39
UBR4-204ENST00000375254 WNT4P56705 351 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 SAPCD1Q5SSQ6 148 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 GLB1LQ6UWU2 654 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 NLRC3Q7RTR2 1065 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 XYLT1Q86Y38 959 aa6.34□□□□□ -1.39
UBR4-204ENST00000375254 CHST13Q8NET6 341 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms