RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 SLC2A12Q8TD20 617 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 ZNF721Q8TF20 911 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 NCLNQ969V3 563 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 TESCQ96BS2 214 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 CTHRC1Q96CG8 243 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 ERP27Q96DN0 273 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 FBXL20Q96IG2 436 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 THOC3Q96J01 351 aaKnown RBP10.59□□□□□ -0.71
HSPG2-202ENST00000374676 OR8D2Q9GZM6 311 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 ADNPQ9H2P0 1102 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 SDR39U1Q9NRG7 319 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-202ENST00000374676 ACSS1Q9NUB1 689 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-202ENST00000374676 ATAD3AQ9NVI7 634 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 ZIM2Q9NZV7 527 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 ZNF639Q9UID6 485 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 TUBD1Q9UJT1 453 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 DCTN4Q9UJW0 460 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 PCDHGB7Q9Y5F8 929 aa10.59□□□□□ -0.71
HSPG2-202ENST00000374676 CPAMD8Q8IZJ3 1885 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 A0A0G2JND7 137 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 MKRN2OSH3BPM6 223 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 ERVH48-1M5A8F1 160 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 CDK2AP1O14519 115 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 PDPK1O15530 556 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 CELA2AP08217 269 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 CT62P0C5K7 136 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 ITGAMP11215 1152 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 NT5EP21589 574 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 NTSP30990 170 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 LSP1P33241 339 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 SOX18P35713 384 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 SOX11P35716 441 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 ARFIP2P53365 341 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 POLE2P56282 527 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 UFM1P61960 85 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 MLC1Q15049 377 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 MPEG1Q2M385 716 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 DPY19L1Q2PZI1 675 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 ZNF628Q5EBL2 1059 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 C6orf163Q5TEZ5 329 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 METTL21CQ5VZV1 264 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 ANKRD26P1Q6NSI1 321 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 FAM180BQ6P0A1 224 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 ARMC10Q8N2F6 343 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 AMER2Q8N7J2 671 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 GLB1L3Q8NCI6 653 aaPredicted RBP10.58□□□□□ -0.72
HSPG2-202ENST00000374676 FDCSPQ8NFU4 85 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 OR7G1Q8NGA0 311 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 OR8J2Q8NGG1 315 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 ZFP28Q8NHY6 868 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 BRIX1Q8TDN6 353 aaKnown RBP10.58□□□□□ -0.72
HSPG2-202ENST00000374676 ZBED6CLQ96FA7 236 aaPredicted RBP10.58□□□□□ -0.72
HSPG2-202ENST00000374676 THOC1Q96FV9 657 aaKnown RBP10.58□□□□□ -0.72
HSPG2-202ENST00000374676 AMDHD1Q96NU7 426 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 LMF1Q96S06 567 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 ARHGAP9Q9BRR9 750 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 DUSP26Q9BV47 211 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 NUDT9Q9BW91 350 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 DEFB126Q9BYW3 111 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 BHLHE41Q9C0J9 482 aaPredicted RBP10.58□□□□□ -0.72
HSPG2-202ENST00000374676 GLIPR2Q9H4G4 154 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 CLMPQ9H6B4 373 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 ZNF552Q9H707 407 aaPredicted RBP10.58□□□□□ -0.72
HSPG2-202ENST00000374676 SLAMF7Q9NQ25 335 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.58□□□□□ -0.722e-7■■■■□ 22.1
HSPG2-202ENST00000374676 TMEM45AQ9NWC5 275 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 GPR83Q9NYM4 423 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 MAT2BQ9NZL9 334 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 KLHL14Q9P2G3 628 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 COPS7AQ9UBW8 275 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 ZNF223Q9UK11 482 aaPredicted RBP10.58□□□□□ -0.72
HSPG2-202ENST00000374676 G3BP2Q9UN86 482 aaKnown RBP10.58□□□□□ -0.72
HSPG2-202ENST00000374676 ERVK-19Q9WJR5 959 aa10.58□□□□□ -0.72
HSPG2-202ENST00000374676 TNRC6AQ8NDV7 1962 aaKnown RBP10.57□□□□□ -0.72
HSPG2-202ENST00000374676 GMNCA6NCL1 334 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 A6NL46 340 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 E9PBE3 544 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 HRKO00198 91 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 PLOD2O00469 737 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 PLOD3O60568 738 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 SLC22A3O75751 556 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 BCAS2O75934 225 aaPredicted RBP10.57□□□□□ -0.72
HSPG2-202ENST00000374676 ZFAND5O76080 213 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 ATP4BP51164 291 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 PGDP52209 483 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 NCBP2P52298 156 aaKnown RBP eCLIP10.57□□□□□ -0.72
HSPG2-202ENST00000374676 MANFP55145 182 aaKnown RBP10.57□□□□□ -0.72
HSPG2-202ENST00000374676 SLC37A1P57057 533 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 GNGT1P63211 74 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 CRB2Q5IJ48 1285 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 AGAP7PQ5VUJ5 663 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 TCTN3Q6NUS6 607 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 FAM111BQ6SJ93 734 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 HSDL2Q6YN16 418 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 LGI4Q8N135 537 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 VWA5B2Q8N398 1253 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 KIF2BQ8N4N8 673 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 ZNF321PQ8N8H1 164 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 ZNF615Q8N8J6 731 aa10.57□□□□□ -0.72
HSPG2-202ENST00000374676 ADCY4Q8NFM4 1077 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms