RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 ERVH48-1M5A8F1 160 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 SLITRK5O94991 958 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 IFI6P09912 130 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 SOX18P35713 384 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 NCBP2P52298 156 aaKnown RBP eCLIP13.98□□□□□ -0.17
HSPG2-201ENST00000374673 GNGT1P63211 74 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 MGAT2Q10469 447 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 ZNF267Q14586 743 aaPredicted RBP13.98□□□□□ -0.17
HSPG2-201ENST00000374673 RPS6KA2Q15349 733 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 LTB4RQ15722 352 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 ZNF628Q5EBL2 1059 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 CPTPQ5TA50 214 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 VWA5B2Q8N398 1253 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 FDCSPQ8NFU4 85 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 OR9A2Q8NGT5 310 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 OR8K3Q8NH51 312 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 ZFP28Q8NHY6 868 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 BRIX1Q8TDN6 353 aaKnown RBP13.98□□□□□ -0.17
HSPG2-201ENST00000374673 CIDECQ96AQ7 238 aaPredicted RBP13.98□□□□□ -0.17
HSPG2-201ENST00000374673 ERP27Q96DN0 273 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 ZBED6CLQ96FA7 236 aaPredicted RBP13.98□□□□□ -0.17
HSPG2-201ENST00000374673 SENP5Q96HI0 755 aaPredicted RBP13.98□□□□□ -0.17
HSPG2-201ENST00000374673 MARK4Q96L34 752 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 AMDHD1Q96NU7 426 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 ARHGAP9Q9BRR9 750 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 DUSP26Q9BV47 211 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 CNPPD1Q9BV87 410 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 NUDT9Q9BW91 350 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 BHLHE41Q9C0J9 482 aaPredicted RBP13.98□□□□□ -0.17
HSPG2-201ENST00000374673 ADNPQ9H2P0 1102 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 GLIPR2Q9H4G4 154 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 CLMPQ9H6B4 373 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 ZNF552Q9H707 407 aaPredicted RBP13.98□□□□□ -0.17
HSPG2-201ENST00000374673 ACSS1Q9NUB1 689 aaPredicted RBP13.98□□□□□ -0.17
HSPG2-201ENST00000374673 GPR83Q9NYM4 423 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 ZIM2Q9NZV7 527 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 COPS7AQ9UBW8 275 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 ZNF639Q9UID6 485 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 G3BP2Q9UN86 482 aaKnown RBP13.98□□□□□ -0.17
HSPG2-201ENST00000374673 ERVK-19Q9WJR5 959 aa13.98□□□□□ -0.17
HSPG2-201ENST00000374673 TRBV11-1A0A0K0K1C0 115 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 A6NL46 340 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 MKRN2OSH3BPM6 223 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 HRKO00198 91 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 CLPSP04118 112 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 LAMP1P11279 417 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 S1PR1P21453 382 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 SOX11P35716 441 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 ATP4BP51164 291 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 ARFIP2P53365 341 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 UFM1P61960 85 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 SRSF11Q05519 484 aaKnown RBP13.97□□□□□ -0.17
HSPG2-201ENST00000374673 MLC1Q15049 377 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 CRB2Q5IJ48 1285 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 FAM111BQ6SJ93 734 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 LGI4Q8N135 537 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 KIF2BQ8N4N8 673 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 ZNF321PQ8N8H1 164 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 GLB1L3Q8NCI6 653 aaPredicted RBP13.97□□□□□ -0.17
HSPG2-201ENST00000374673 ADCY4Q8NFM4 1077 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 OR7G1Q8NGA0 311 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 OR8J2Q8NGG1 315 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 DOK4Q8TEW6 326 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 NUDT8Q8WV74 236 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 WBP1Q96G27 269 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 TEX37Q96LM6 180 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 RILPQ96NA2 401 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 SMAD5Q99717 465 aaKnown RBP13.97□□□□□ -0.17
HSPG2-201ENST00000374673 SLC25A23Q9BV35 468 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.97□□□□□ -0.177e-7■■■■□ 26.2
HSPG2-201ENST00000374673 LHX6Q9UPM6 363 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 PCDHGB7Q9Y5F8 929 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 CFAP47Q6ZTR5 3102 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 PKD1L2Q7Z442 2459 aa13.97□□□□□ -0.17
HSPG2-201ENST00000374673 GMNCA6NCL1 334 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 OR6C76A6NM76 312 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 PLOD2O00469 737 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 IL12AP29459 219 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 SSTR4P31391 388 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 PTGER1P34995 402 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 KIR3DL1P43629 444 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 SEC24CP53992 1094 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 NME5P56597 212 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 SLC37A1P57057 533 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 STX1BP61266 288 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 MRPS35P82673 323 aaKnown RBP13.96□□□□□ -0.17
HSPG2-201ENST00000374673 KCNAB2Q13303 367 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 RAPSNQ13702 412 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 AGAP7PQ5VUJ5 663 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 METTL21CQ5VZV1 264 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 HSDL2Q6YN16 418 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 RNF111Q6ZNA4 994 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 ARMC10Q8N2F6 343 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 MIER2Q8N344 545 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 SLC5A8Q8N695 610 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 SIRT6Q8N6T7 355 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 ZNF615Q8N8J6 731 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 C10orf82Q8WW14 230 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 AGAP4Q96P64 663 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 DEFB126Q9BYW3 111 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms