RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 MAGEB10Q96LZ2 347 aaPredicted RBP14.05□□□□□ -0.16
COL9A2-202ENST00000372748 DCLRE1CQ96SD1 692 aaKnown RBP14.05□□□□□ -0.16
COL9A2-202ENST00000372748 MVB12BQ9H7P6 319 aa14.05□□□□□ -0.16
COL9A2-202ENST00000372748 ATP6V1HQ9UI12 483 aa14.05□□□□□ -0.16
COL9A2-202ENST00000372748 KCND3Q9UK17 655 aa14.05□□□□□ -0.16
COL9A2-202ENST00000372748 CPEP16870 476 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 IMPA1P29218 277 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 FABP5Q01469 135 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 PIN1Q13526 163 aaPredicted RBP14.04□□□□□ -0.16
COL9A2-202ENST00000372748 SYT14P1Q58G82 188 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 TMEM201Q5SNT2 666 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 Q6ZVL8 140 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 NATD1Q8N6N6 113 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 DTX3Q8N9I9 347 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 OR4D11Q8NGI4 311 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 SLC7A13Q8TCU3 470 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 QRFPRQ96P65 431 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 CTPS2Q9NRF8 586 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 GULP1Q9UBP9 304 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 CCL26Q9Y258 94 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 RANBP2P49792 3224 aaKnown RBP14.04□□□□□ -0.16
COL9A2-202ENST00000372748 ZNF106Q9H2Y7 1883 aaKnown RBP14.04□□□□□ -0.16
COL9A2-202ENST00000372748 ISM1B1AKI9 464 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 C5orf58C9J3I9 102 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 SLC16A5O15375 505 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 PSIP1O75475 530 aaKnown RBP14.04□□□□□ -0.16
COL9A2-202ENST00000372748 SCO1O75880 301 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 HSD3B1P14060 373 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 HSD3B2P26439 372 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 AVPR1BP47901 424 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 WDR5P61964 334 aaKnown RBP14.04□□□□□ -0.16
COL9A2-202ENST00000372748 ALDH6A1Q02252 535 aaKnown RBP14.04□□□□□ -0.16
COL9A2-202ENST00000372748 ELOAQ14241 798 aaKnown RBP14.04□□□□□ -0.16
COL9A2-202ENST00000372748 REEP3Q6NUK4 255 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 PGBD2Q6P3X8 592 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 TIGD4Q8IY51 512 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 TCEAL8Q8IYN2 117 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL9A2-202ENST00000372748 SLC38A5Q8WUX1 472 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 ECHDC3Q96DC8 303 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 WACQ9BTA9 647 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 NARFLQ9H6Q4 476 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 GPR52Q9Y2T5 361 aa14.04□□□□□ -0.16
COL9A2-202ENST00000372748 ARRDC5A6NEK1 342 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 LEFTY2O00292 366 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 SGTAO43765 313 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 SH3BP5O60239 455 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 RAB36O95755 333 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 PRKAR1AP10644 381 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 ARSBP15848 533 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 DDX5P17844 614 aaKnown RBP14.03□□□□□ -0.16
COL9A2-202ENST00000372748 PBLDP30039 288 aaPredicted RBP14.03□□□□□ -0.16
COL9A2-202ENST00000372748 MED27Q6P2C8 311 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 HTR3DQ70Z44 454 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 HSD11B1LQ7Z5J1 315 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 TMEM25Q86YD3 366 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 HORMAD2Q8N7B1 307 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 OR8H1Q8NGG4 311 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 C16orf78Q8WTQ4 265 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 ZNF558Q96NG5 402 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 SLC6A16Q9GZN6 736 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 PPP1R3EQ9H7J1 279 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 CXorf36Q9H7Y0 433 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 NIPAL2Q9H841 368 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 ATP13A2Q9NQ11 1180 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 SEMA3GQ9NS98 782 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 COQ3Q9NZJ6 369 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 ANKDD1BA6NHY2 528 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 TSPAN6O43657 245 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 PLOD3O60568 738 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 H1F0P07305 194 aaKnown RBP14.03□□□□□ -0.16
COL9A2-202ENST00000372748 GSTM1P09488 218 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 MYL12AP19105 171 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 SOX18P35713 384 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 ETV3P41162 512 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 INPP1P49441 399 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 MAPK12P53778 367 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 CTBP2P56545 445 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 RRAS2P62070 204 aaPredicted RBP14.03□□□□□ -0.16
COL9A2-202ENST00000372748 LRRC32Q14392 662 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 SYTL3Q4VX76 610 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 ZNF57Q68EA5 555 aaPredicted RBP14.03□□□□□ -0.16
COL9A2-202ENST00000372748 ACSM5Q6NUN0 579 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 MZT2BQ6NZ67 158 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 UNC5DQ6UXZ4 953 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 B3GLCTQ6Y288 498 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 OLIG3Q7RTU3 272 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 LSRQ86X29 649 aaPredicted RBP14.03□□□□□ -0.16
COL9A2-202ENST00000372748 LIX1LQ8IVB5 337 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 SLC39A11Q8N1S5 342 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 APOBEC4Q8WW27 367 aaKnown RBP14.03□□□□□ -0.16
COL9A2-202ENST00000372748 MTG2Q9H4K7 406 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 DIMT1Q9UNQ2 313 aaKnown RBP14.03□□□□□ -0.16
COL9A2-202ENST00000372748 SPEF1Q9Y4P9 236 aa14.03□□□□□ -0.16
COL9A2-202ENST00000372748 HELZP42694 1942 aaKnown RBP14.03□□□□□ -0.16
COL9A2-202ENST00000372748 LEUTXA8MZ59 168 aa14.02□□□□□ -0.16
COL9A2-202ENST00000372748 NEDD8-MDP1E9PL57 170 aa14.02□□□□□ -0.16
COL9A2-202ENST00000372748 IL3P08700 152 aa14.02□□□□□ -0.16
COL9A2-202ENST00000372748 PKLRP30613 574 aa14.02□□□□□ -0.16
COL9A2-202ENST00000372748 IRS1P35568 1242 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms