RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TSPEARQ8WU66 669 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 NKD1Q969G9 470 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 SIGLEC10Q96LC7 697 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 KLF16Q9BXK1 252 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 L7N2F9 121 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 PPP1R2P9O14990 202 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 DBIP07108 87 aaKnown RBP12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 C8orf89P0DMQ9 161 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 FBLP22087 321 aaKnown RBP12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 RBMS1P29558 406 aaKnown RBP12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 RABL3Q5HYI8 236 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF627Q7L945 461 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 TREML1Q86YW5 311 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 IL22RA1Q8N6P7 574 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 COQ8AQ8NI60 647 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 GRHL3Q8TE85 626 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 PPA2Q9H2U2 334 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 ADAMTS6Q9UKP5 1117 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 ERVK-19Q9WJR5 959 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 PLEKHM1Q9Y4G2 1056 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 FXYD6-FXYD2A0A087WZ82 144 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 ARL6IP5O75915 188 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 ELK4P28324 431 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 LSAMPQ13449 338 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 BTBD16Q32M84 506 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 CLEC12AQ5QGZ9 265 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 COX15Q7KZN9 410 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 SCD5Q86SK9 330 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZDHHC1Q8WTX9 485 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 PGAP3Q96FM1 320 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 TRIB3Q96RU7 358 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 HERPUD2Q9BSE4 406 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 FXYD6Q9H0Q3 95 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF576Q9H609 170 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 IFT22Q9H7X7 185 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 FAM120CQ9NX05 1096 aaKnown RBP12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 EFCAB7A8K855 629 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 DENRO43583 198 aaKnown RBP12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 LDB2O43679 373 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 APBB3O95704 486 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 SLC10A2Q12908 348 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF367Q7RTV3 350 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 PAQR7Q86WK9 346 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 MYH6P13533 1939 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 RAB36O95755 333 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 OPN1SWP03999 348 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 G6PDP11413 515 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 EDNRAP25101 427 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 MC1RQ01726 317 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF678Q5SXM1 525 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 ADGRD2Q7Z7M1 963 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 FUZQ9BT04 418 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 WACQ9BTA9 647 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 PRTFDC1Q9NRG1 225 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 DKKL1Q9UK85 242 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 OARD1Q9Y530 152 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR1A2Q9Y585 309 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 SLC19A2O60779 497 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 HNRNPA2B1P22626 353 aaKnown RBP12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 TMEM236Q5W0B7 351 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 IQCHQ86VS3 1027 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 ANKRD13BQ86YJ7 626 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 CHST14Q8NCH0 376 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR6K6Q8NGW6 343 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 TRMT2BQ96GJ1 504 aaKnown RBP12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 SLC45A3Q96JT2 553 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 HHIPQ96QV1 700 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 C17orf62Q9BQA9 187 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 CTPS2Q9NRF8 586 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 MED16Q9Y2X0 877 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 RFPL1O75677 317 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 HCKP08631 526 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 LCN1P31025 176 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 UGT2B10P36537 528 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 LEPRP48357 1165 aaKnown RBP12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 PDX1P52945 283 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 CDK6Q00534 326 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 MEF2AQ02078 507 aaPredicted RBP12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 PCBP2Q15366 365 aaKnown RBP eCLIP12.74□□□□□ -0.379e-12■□□□□ 8.6
RAPGEF1-201ENST00000372189 ARL9Q6T311 187 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 NAXEQ8NCW5 288 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 NFKBIDQ8NI38 313 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 LRCH3Q96II8 777 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 SCGB3A2Q96PL1 93 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 PKP4Q99569 1192 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 SLX4Q8IY92 1834 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 SH3PXD2BA1X283 911 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 HTR3EA5X5Y0 456 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 KIAA1324LA8MWY0 1029 aaPredicted RBP12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 KCNJ13O60928 360 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 MAP3K8P41279 467 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 LPAL2Q16609 132 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 HTR3DQ70Z44 454 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 GALNT11Q8NCW6 608 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 KAT6AQ92794 2004 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 HSFX1Q9UBD0 423 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 TIMM8BQ9Y5J9 83 aaPredicted RBP12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR6C6A6NF89 314 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 CAPN5O15484 640 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms