RNA–Protein interactions for RNA: ENST00000371747.7

TTC39A-203, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-203ENST00000371747 NUP43Q8NFH3 380 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 MIPOL1Q8TD10 442 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 KAT2AQ92830 837 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 ZNF300Q96RE9 604 aaPredicted RBP21.41■■□□□ 1.02
TTC39A-203ENST00000371747 YIPF4Q9BSR8 244 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 IER2Q9BTL4 223 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 CLK4Q9HAZ1 481 aaKnown RBP21.41■■□□□ 1.02
TTC39A-203ENST00000371747 SH3GLB1Q9Y371 365 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 PCDHGB3Q9Y5G1 929 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 CD247P20963 164 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 ANXA11P50995 505 aaKnown RBP21.41■■□□□ 1.02
TTC39A-203ENST00000371747 RAD23AP54725 363 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 C14orf28Q4W4Y0 310 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 ZC3H12BQ5HYM0 836 aaKnown RBP21.41■■□□□ 1.02
TTC39A-203ENST00000371747 FAM92BQ6ZTR7 304 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 OR4N5Q8IXE1 308 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 DNAJC22Q8N4W6 341 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 OR5T3Q8NGG3 340 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 OTUB1Q96FW1 271 aaPredicted RBP21.41■■□□□ 1.02
TTC39A-203ENST00000371747 C16orf58Q96GQ5 468 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 ORC6Q9Y5N6 252 aa21.41■■□□□ 1.02
TTC39A-203ENST00000371747 TP53BP1Q12888 1972 aaPredicted RBP21.41■■□□□ 1.02
TTC39A-203ENST00000371747 TECTAO75443 2155 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 ADAMDEC1O15204 470 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 RECKO95980 971 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 TFAP2AP05549 437 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 NR2F1P10589 423 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 ATP6V1B1P15313 513 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 ITGA2P17301 1181 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 IGFBP5P24593 272 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 PIGAP37287 484 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 KDM4DQ6B0I6 523 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 USP53Q70EK8 1073 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 SHISA5Q8N114 240 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 ARHGEF39Q8N4T4 335 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 ZNF555Q8NEP9 628 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 TSPAN14Q8NG11 270 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 TREX2Q9BQ50 279 aaPredicted RBP21.4■■□□□ 1.02
TTC39A-203ENST00000371747 RSPO3Q9BXY4 272 aaPredicted RBP21.4■■□□□ 1.02
TTC39A-203ENST00000371747 ANKRA2Q9H9E1 313 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 TESMINQ9Y4I5 508 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 SPACA6W5XKT8 324 aa21.4■■□□□ 1.02
TTC39A-203ENST00000371747 KIF1CO43896 1103 aaKnown RBP21.39■■□□□ 1.02
TTC39A-203ENST00000371747 MITFO75030 526 aaPredicted RBP21.39■■□□□ 1.02
TTC39A-203ENST00000371747 YAP1P46937 504 aaKnown RBP21.39■■□□□ 1.02
TTC39A-203ENST00000371747 FOXB2Q5VYV0 432 aa21.39■■□□□ 1.02
TTC39A-203ENST00000371747 CA13Q8N1Q1 262 aa21.39■■□□□ 1.02
TTC39A-203ENST00000371747 GPR32P1Q8NGA4 272 aa21.39■■□□□ 1.02
TTC39A-203ENST00000371747 EDAQ92838 391 aa21.39■■□□□ 1.02
TTC39A-203ENST00000371747 COL26A1Q96A83 441 aa21.39■■□□□ 1.02
TTC39A-203ENST00000371747 TCTN2Q96GX1 697 aa21.39■■□□□ 1.02
TTC39A-203ENST00000371747 ZNF607Q96SK3 696 aa21.39■■□□□ 1.02
TTC39A-203ENST00000371747 LYVE1Q9Y5Y7 322 aa21.39■■□□□ 1.02
TTC39A-203ENST00000371747 THADAQ6YHU6 1953 aa21.39■■□□□ 1.02
TTC39A-203ENST00000371747 CCDC88CQ9P219 2028 aa21.39■■□□□ 1.01
TTC39A-203ENST00000371747 A0A1B0GVT2 93 aa21.39■■□□□ 1.01
TTC39A-203ENST00000371747 CYR61O00622 381 aa21.39■■□□□ 1.01
TTC39A-203ENST00000371747 PPP2R1BP30154 601 aa21.39■■□□□ 1.01
TTC39A-203ENST00000371747 KCTD21Q4G0X4 260 aa21.39■■□□□ 1.01
TTC39A-203ENST00000371747 LIN52Q52LA3 116 aa21.39■■□□□ 1.01
TTC39A-203ENST00000371747 APOBEC4Q8WW27 367 aaKnown RBP21.39■■□□□ 1.01
TTC39A-203ENST00000371747 SCN2AQ99250 2005 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 SGK494L7N484 410 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 TNFRSF11BO00300 401 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 SRPX2O60687 465 aaPredicted RBP21.38■■□□□ 1.01
TTC39A-203ENST00000371747 DNAJB5O75953 348 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 FESP07332 822 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 XCR1P46094 333 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 RPL5P46777 297 aaKnown RBP21.38■■□□□ 1.01
TTC39A-203ENST00000371747 SHC2P98077 582 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 KCNC4Q03721 635 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 FUT5Q11128 374 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 PUM1Q14671 1186 aaKnown RBP eCLIP21.38■■□□□ 1.01
TTC39A-203ENST00000371747 PRTGQ2VWP7 1150 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 GALNT5Q7Z7M9 940 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 LGI4Q8N135 537 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 TMEM52Q8NDY8 209 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 OR7G2Q8NG99 324 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 GIMAP5Q96F15 307 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 COL21A1Q96P44 957 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 NPLQ9BXD5 320 aaPredicted RBP21.38■■□□□ 1.01
TTC39A-203ENST00000371747 EXD2Q9NVH0 621 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 NTMQ9P121 344 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 GPC6Q9Y625 555 aaPredicted RBP21.38■■□□□ 1.01
TTC39A-203ENST00000371747 ENPP4Q9Y6X5 453 aa21.38■■□□□ 1.01
TTC39A-203ENST00000371747 LOC100130705A0A1B0GUX0 176 aa21.37■■□□□ 1.01
TTC39A-203ENST00000371747 J3KTA2 159 aa21.37■■□□□ 1.01
TTC39A-203ENST00000371747 CPMP14384 443 aa21.37■■□□□ 1.01
TTC39A-203ENST00000371747 PORP16435 677 aaPredicted RBP21.37■■□□□ 1.01
TTC39A-203ENST00000371747 POLR2IP36954 125 aaKnown RBP21.37■■□□□ 1.01
TTC39A-203ENST00000371747 KCNJ5P48544 419 aa21.37■■□□□ 1.01
TTC39A-203ENST00000371747 PPM1FP49593 454 aaPredicted RBP21.37■■□□□ 1.01
TTC39A-203ENST00000371747 CRISP3P54108 245 aa21.37■■□□□ 1.01
TTC39A-203ENST00000371747 GFERP55789 205 aa21.37■■□□□ 1.01
TTC39A-203ENST00000371747 SPIBQ01892 262 aa21.37■■□□□ 1.01
TTC39A-203ENST00000371747 FAHD1Q6P587 224 aa21.37■■□□□ 1.01
TTC39A-203ENST00000371747 PIK3C3Q8NEB9 887 aa21.37■■□□□ 1.01
TTC39A-203ENST00000371747 TGM7Q96PF1 710 aa21.37■■□□□ 1.01
TTC39A-203ENST00000371747 OR7D2Q96RA2 312 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms