RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 CLDN4O14493 209 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 SLITRK5O94991 958 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 IFI6P09912 130 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 SLC35E2P0CK97 266 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 UMPSP11172 480 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 MAGEA8P43361 318 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 PRR5P85299 388 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 EEF1A2Q05639 463 aaKnown RBP22.4■■□□□ 1.18
SNX3-203ENST00000368979 CEACAM20Q6UY09 585 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 PACS2Q86VP3 889 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 KAT2AQ92830 837 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 MAGED4Q96JG8 741 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 OR1F2PQ96R84 312 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 ZNF304Q9HCX3 659 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 OCIAD1Q9NX40 245 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 NCDNQ9UBB6 729 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 AP4S1Q9Y587 144 aa22.4■■□□□ 1.18
SNX3-203ENST00000368979 ARAFP10398 606 aa22.39■■□□□ 1.17
SNX3-203ENST00000368979 PSMA4P25789 261 aaKnown RBP22.39■■□□□ 1.17
SNX3-203ENST00000368979 CSTF2P33240 577 aaKnown RBP eCLIP22.39■■□□□ 1.17
SNX3-203ENST00000368979 HSD17B7P56937 341 aa22.39■■□□□ 1.17
SNX3-203ENST00000368979 SLC13A2Q13183 592 aa22.39■■□□□ 1.17
SNX3-203ENST00000368979 ERV3-1Q14264 604 aa22.39■■□□□ 1.17
SNX3-203ENST00000368979 SZRD1Q7Z422 152 aa22.39■■□□□ 1.17
SNX3-203ENST00000368979 OR7G2Q8NG99 324 aa22.39■■□□□ 1.17
SNX3-203ENST00000368979 ZNF675Q8TD23 568 aa22.39■■□□□ 1.17
SNX3-203ENST00000368979 LANCL2Q9NS86 450 aa22.39■■□□□ 1.17
SNX3-203ENST00000368979 DCAF13Q9NV06 445 aaKnown RBP22.39■■□□□ 1.17
SNX3-203ENST00000368979 OLAHQ9NV23 265 aa22.39■■□□□ 1.17
SNX3-203ENST00000368979 ARMC1Q9NVT9 282 aa22.39■■□□□ 1.17
SNX3-203ENST00000368979 PTGFRNQ9P2B2 879 aa22.39■■□□□ 1.17
SNX3-203ENST00000368979 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 MYOCOSA0A1B0GUC4 107 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 C4orf47A7E2U8 309 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 AGRPO00253 132 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 UPK1AO00322 258 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 CDC123O75794 336 aaPredicted RBP22.38■■□□□ 1.17
SNX3-203ENST00000368979 TIAF1O95411 115 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 BAG2O95816 211 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 FBLP22087 321 aaKnown RBP22.38■■□□□ 1.17
SNX3-203ENST00000368979 TGM1P22735 817 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 NBL1P41271 181 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 PRIM2P49643 509 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 MRPS35P82673 323 aaKnown RBP22.38■■□□□ 1.17
SNX3-203ENST00000368979 ZNF630Q2M218 657 aaPredicted RBP22.38■■□□□ 1.17
SNX3-203ENST00000368979 TNFAIP8L2Q6P589 184 aaPredicted RBP22.38■■□□□ 1.17
SNX3-203ENST00000368979 BPHLQ86WA6 291 aaPredicted RBP22.38■■□□□ 1.17
SNX3-203ENST00000368979 OR2L13Q8N349 312 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 BMPERQ8N8U9 685 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 AGBL5Q8NDL9 886 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 NUP43Q8NFH3 380 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 MIPOL1Q8TD10 442 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 GIMAP5Q96F15 307 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 STOML1Q9UBI4 398 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 ANAPC2Q9UJX6 822 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 SPTBP11277 2137 aa22.38■■□□□ 1.17
SNX3-203ENST00000368979 EFCAB7A8K855 629 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 HMGN4O00479 90 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 JRKO75564 520 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 SCRG1O75711 98 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 HMGN2P05204 90 aaKnown RBP22.37■■□□□ 1.17
SNX3-203ENST00000368979 FGF5P12034 268 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 MATN1P21941 496 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 IL10P22301 178 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 CCKBRP32239 447 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 PRKAG1P54619 331 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 BTG2P78543 158 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 ILKQ13418 452 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 SCARB2Q14108 478 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 PRICKLE4Q2TBC4 344 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 FHL5Q5TD97 284 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 C1orf189Q5VU69 101 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 PWWP2BQ6NUJ5 590 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 FAM111BQ6SJ93 734 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 TMEM126BQ8IUX1 230 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 PQLC1Q8N2U9 271 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 FAM110BQ8TC76 370 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 CDC6Q99741 560 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 OR51I1Q9H343 314 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 ANKRA2Q9H9E1 313 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 APMAPQ9HDC9 416 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 A4GALTQ9NPC4 353 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 FAM86C1Q9NVL1 165 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 DDX18Q9NVP1 670 aaKnown RBP22.37■■□□□ 1.17
SNX3-203ENST00000368979 MAT2BQ9NZL9 334 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 NUP210LQ5VU65 1888 aa22.37■■□□□ 1.17
SNX3-203ENST00000368979 A0A087WV62 115 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 SERPINA1P01009 418 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 NT5EP21589 574 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 KDELR2P33947 212 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 KHKP50053 298 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 SESN3P58005 492 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 CDK6Q00534 326 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 MGAT2Q10469 447 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 ARHGAP40Q5TG30 622 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 RBM44Q6ZP01 1051 aaKnown RBP22.36■■□□□ 1.17
SNX3-203ENST00000368979 PPP1R3BQ86XI6 285 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 ST13P4Q8IZP2 240 aaPredicted RBP22.36■■□□□ 1.17
SNX3-203ENST00000368979 EID3Q8N140 333 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 PAPD5Q8NDF8 572 aaKnown RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms