RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 CPNE5Q9HCH3 593 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 MRPS30Q9NP92 439 aaKnown RBP10.1□□□□□ -0.79
TPM3-212ENST00000368533 RPRD1BQ9NQG5 326 aaKnown RBP10.1□□□□□ -0.79
TPM3-212ENST00000368533 SPATA6Q9NWH7 488 aaPredicted RBP10.1□□□□□ -0.79
TPM3-212ENST00000368533 SNX11Q9Y5W9 270 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 A0A1W2PQ72 361 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 GABRR3A8MPY1 467 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 CENPXA8MT69 81 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 TFECO14948 347 aaPredicted RBP10.1□□□□□ -0.79
TPM3-212ENST00000368533 FAM20BO75063 409 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 TSPAN9O75954 239 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 FABP3P05413 133 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 PRPS1L1P21108 318 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 CSNK1EP49674 416 aaKnown RBP10.1□□□□□ -0.79
TPM3-212ENST00000368533 ISL1P61371 349 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 EMX1Q04741 257 aaPredicted RBP10.1□□□□□ -0.79
TPM3-212ENST00000368533 ILF3Q12906 894 aaKnown RBP eCLIP10.1□□□□□ -0.79
TPM3-212ENST00000368533 CDK5R2Q13319 367 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 TOP3AQ13472 1001 aaPredicted RBP10.1□□□□□ -0.79
TPM3-212ENST00000368533 TUBA3CQ13748 450 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 GPR18Q14330 331 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 CDK10Q15131 360 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 SMN1Q16637 294 aaKnown RBP10.1□□□□□ -0.79
TPM3-212ENST00000368533 RFX4Q33E94 735 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 CPZQ66K79 652 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 SZRD1Q7Z422 152 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 TRIM69Q86WT6 500 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 NRROSQ86YC3 692 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 PIK3C3Q8NEB9 887 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 MCFD2Q8NI22 146 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 SPPL2AQ8TCT8 520 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 MAL2Q969L2 176 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 FAM131CQ96AQ9 280 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 HSH2DQ96JZ2 352 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 SRMSQ9H3Y6 488 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 REEP1Q9H902 201 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 FBRSQ9HAH7 460 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 FSCN3Q9NQT6 498 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 KRT84Q9NSB2 600 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 UNC13CQ8NB66 2214 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 GPR179Q6PRD1 2367 aa10.1□□□□□ -0.79
TPM3-212ENST00000368533 OR6C74A6NCV1 312 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 TPPPO94811 219 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 TBX6O95947 436 aaPredicted RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 WNT1P04628 370 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 IL3P08700 152 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 ZP2Q05996 745 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 C2orf80Q0P641 193 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 EIF2B5Q13144 721 aaKnown RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 PRSS53Q2L4Q9 553 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 VMACQ2NL98 169 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 ZNF551Q7Z340 670 aaPredicted RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 TTC29Q8NA56 475 aaPredicted RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 SETD9Q8NE22 299 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 UBE2FQ969M7 185 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 OTUB1Q96FW1 271 aaPredicted RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 CNDP2Q96KP4 475 aaKnown RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 FYTTD1Q96QD9 318 aaKnown RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 EFCAB11Q9BUY7 163 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 SLC6A20Q9NP91 592 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 STARD5Q9NSY2 213 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 QPCTLQ9NXS2 382 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 USE1Q9NZ43 259 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 ZNF451Q9Y4E5 1061 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 FREM2Q5SZK8 3169 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 TMEM265A0A087WTH1 108 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 TRBV5-3A0A0A0MS03 114 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 A8MUA0 341 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 ZNF99A8MXY4 864 aaPredicted RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 PLPP1O14494 284 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 NDUFS4O43181 175 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 SH3BP5O60239 455 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 CPNE3O75131 537 aaKnown RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 NUDT7P0C024 238 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 DBTP11182 482 aaKnown RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 JUNDP17535 347 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 KDELR2P33947 212 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 CCR8P51685 355 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 MAZP56270 477 aaKnown RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 OR2B6P58173 313 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 CSNK1G2P78368 415 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 VLDLRP98155 873 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 FZD2Q14332 565 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 DEFB110Q30KQ9 67 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 LRIF1Q5T3J3 769 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 ZNF691Q5VV52 312 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 METTL2BQ6P1Q9 378 aaKnown RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 AMIGO1Q86WK6 493 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 IL17RDQ8NFM7 739 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 DNAJB8Q8NHS0 232 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 ZCCHC10Q8TBK6 192 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 PROX1Q92786 737 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 MUL1Q969V5 352 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 KLHDC7BQ96G42 594 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 NEDD4LQ96PU5 975 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 DHRS9Q9BPW9 319 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 MAGIXQ9H6Y5 334 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 AMBNQ9NP70 447 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 TAAR2Q9P1P5 351 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 RAPGEFL1Q9UHV5 662 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms