RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 SLC15A1P46059 708 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 LIMK1P53667 647 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 PDGFRLQ15198 375 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 AGBL4Q5VU57 503 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 CCDC116Q8IYX3 515 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 MINDY2Q8NBR6 621 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 CREB3L4Q8TEY5 395 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 CHFRQ96EP1 664 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 CNPPD1Q9BV87 410 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 ANKRA2Q9H9E1 313 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 SLC35C2Q9NQQ7 365 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 P2RX2Q9UBL9 471 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 A4GNTQ9UNA3 340 aa17.11■□□□□ 0.33
UBQLN4-201ENST00000368309 CTDSP2O14595 271 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 TBX19O60806 448 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 UBE3AQ05086 875 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 FGL2Q14314 439 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 PODNL1Q6PEZ8 512 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 TRIM73Q86UV7 250 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 HDDC3Q8N4P3 179 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 JPH3Q8WXH2 748 aaPredicted RBP17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 CAMK1GQ96NX5 476 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 BBS4Q96RK4 519 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 SLC25A19Q9HC21 320 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 THAP10Q9P2Z0 257 aaPredicted RBP17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 C4orf51C9J302 202 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 WWP2O00308 870 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 FAAHO00519 579 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 UGT2B17O75795 530 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 KAT7O95251 611 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 LASP1Q14847 261 aaKnown RBP17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 IRF4Q15306 451 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 AGAP7PQ5VUJ5 663 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 PAQR6Q6TCH4 344 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 NATD1Q8N6N6 113 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 TRANK1O15050 2925 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 A0A0A6YYD5 115 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 TLX2O43763 284 aaPredicted RBP17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 GJA4P35212 333 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 BCL6P41182 706 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 SLAMF1Q13291 335 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 TBC1D19Q8N5T2 526 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 OPALINQ96PE5 141 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 ACSS1Q9NUB1 689 aaPredicted RBP17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 FBXW2Q9UKT8 454 aa17.1■□□□□ 0.33
UBQLN4-201ENST00000368309 ERI3O43414 337 aaKnown RBP17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 KDM1AO60341 852 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 BUD31P41223 144 aaPredicted RBP17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 CST6Q15828 149 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 SLX4IPQ5VYV7 408 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 C11orf74Q86VG3 221 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 LSRQ86X29 649 aaPredicted RBP17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 OR6T1Q8NGN1 323 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 FNDC11Q9BVV2 318 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 NXF2Q9GZY0 626 aaKnown RBP17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 NUAK2Q9H093 628 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 PRKAG2Q9UGJ0 569 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 ATG4BQ9Y4P1 393 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 TAF4O00268 1085 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 DLGAP3O95886 979 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 SOX9P48436 509 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 KLHL6Q8WZ60 621 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 C16orf58Q96GQ5 468 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 GPA33Q99795 319 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 TRMT61BQ9BVS5 477 aaKnown RBP17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 TEX101Q9BY14 249 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 GIN1Q9NXP7 522 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 GPC6Q9Y625 555 aaPredicted RBP17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 AQP9O43315 295 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 SERPINB1P30740 379 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 DUSP2Q05923 314 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 PSRC1Q6PGN9 363 aaPredicted RBP17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 ZER1Q7Z7L7 766 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 PSD4Q8NDX1 1056 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 SLC6A18Q96N87 628 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 HHATLQ9HCP6 504 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 ACSL5Q9ULC5 683 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 KCNE3Q9Y6H6 103 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 STON1Q9Y6Q2 735 aa17.09■□□□□ 0.33
UBQLN4-201ENST00000368309 PDZK1P1A8MUH7 402 aa17.08■□□□□ 0.33
UBQLN4-201ENST00000368309 CHRM4P08173 479 aa17.08■□□□□ 0.33
UBQLN4-201ENST00000368309 CHRM5P08912 532 aaPredicted RBP17.08■□□□□ 0.33
UBQLN4-201ENST00000368309 RAB28P51157 221 aa17.08■□□□□ 0.33
UBQLN4-201ENST00000368309 RAB8AP61006 207 aa17.08■□□□□ 0.33
UBQLN4-201ENST00000368309 SNRPGP62308 76 aaKnown RBP17.08■□□□□ 0.33
UBQLN4-201ENST00000368309 KIAA1161Q6NSJ0 714 aa17.08■□□□□ 0.33
UBQLN4-201ENST00000368309 TSSK6Q9BXA6 273 aa17.08■□□□□ 0.33
UBQLN4-201ENST00000368309 RERGLQ9H628 205 aa17.08■□□□□ 0.33
UBQLN4-201ENST00000368309 CCDC59Q9P031 241 aaKnown RBP17.08■□□□□ 0.33
UBQLN4-201ENST00000368309 PAIP2BQ9ULR5 123 aaKnown RBP17.08■□□□□ 0.33
UBQLN4-201ENST00000368309 ZFR2Q9UPR6 939 aaKnown RBP17.08■□□□□ 0.33
UBQLN4-201ENST00000368309 A0A1W2PR48 441 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 EPPINO95925 133 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 HMGN2P05204 90 aaKnown RBP17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 MMP11P24347 488 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 PPP2R1BP30154 601 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 SLC9A5Q14940 896 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 C18orf63Q68DL7 685 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 IQCHQ86VS3 1027 aa17.08■□□□□ 0.32
UBQLN4-201ENST00000368309 KRT73Q86Y46 540 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms