RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 TCEANCQ8N8B7 351 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 AMDHD1Q96NU7 426 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 SDHCQ99643 169 aaPredicted RBP13.52□□□□□ -0.25
CD48-201ENST00000368045 CTRCQ99895 268 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 KCNS3Q9BQ31 491 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 FNDC11Q9BVV2 318 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 ABCG4Q9H172 646 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 TMEM245Q9H330 911 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 OR51I1Q9H343 314 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 IL23AQ9NPF7 189 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 ISYNA1Q9NPH2 558 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 ACSL5Q9ULC5 683 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 KLHL20Q9Y2M5 609 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 GRIP1Q9Y3R0 1128 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 SNX11Q9Y5W9 270 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 ALPK3Q96L96 1907 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 HEPACAM2A8MVW5 462 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 H7BY64 318 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 CTDSP2O14595 271 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 CASC3O15234 703 aaKnown RBP13.51□□□□□ -0.25
CD48-201ENST00000368045 OR1F1O43749 312 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 RAB36O95755 333 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 LGI1O95970 557 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 IL1AP01583 271 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 FGBP02675 491 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 OR12D1P0DN82 309 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 EPCAMP16422 314 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 CTNNB1P35222 781 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 RPS19P39019 145 aaKnown RBP13.51□□□□□ -0.25
CD48-201ENST00000368045 FEN1P39748 380 aaKnown RBP13.51□□□□□ -0.25
CD48-201ENST00000368045 OPRD1P41143 372 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 SOX3P41225 446 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 P2RY2P41231 377 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 UBE3AQ05086 875 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 RUNX1T1Q06455 604 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 ZNF234Q14588 700 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 LRIT3Q3SXY7 679 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 KLHL22Q53GT1 634 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 C3orf38Q5JPI3 329 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 FAM180BQ6P0A1 224 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 PRR23CQ6ZRP0 262 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 RBM45Q8IUH3 476 aaKnown RBP13.51□□□□□ -0.25
CD48-201ENST00000368045 CLIP4Q8N3C7 705 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 PLA2G15Q8NCC3 412 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 SP7Q8TDD2 431 aaPredicted RBP13.51□□□□□ -0.25
CD48-201ENST00000368045 POF1BQ8WVV4 589 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 MOAP1Q96BY2 351 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 PRRC1Q96M27 445 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 SLC6A18Q96N87 628 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 PRAP1Q96NZ9 151 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 POLR2J2Q9GZM3 115 aaKnown RBP13.51□□□□□ -0.25
CD48-201ENST00000368045 SLC35C2Q9NQQ7 365 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 MRPS18AQ9NVS2 196 aaKnown RBP13.51□□□□□ -0.25
CD48-201ENST00000368045 TEX10Q9NXF1 929 aaPredicted RBP13.51□□□□□ -0.25
CD48-201ENST00000368045 DPP7Q9UHL4 492 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 CLEC2DQ9UHP7 191 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 PRKAB1Q9Y478 270 aa13.51□□□□□ -0.25
CD48-201ENST00000368045 PCYT1BQ9Y5K3 369 aaPredicted RBP13.51□□□□□ -0.25
CD48-201ENST00000368045 MTCL1Q9Y4B5 1905 aaKnown RBP13.51□□□□□ -0.25
CD48-201ENST00000368045 KIF26AQ9ULI4 1882 aaPredicted RBP13.51□□□□□ -0.25
CD48-201ENST00000368045 FEZF1A0PJY2 475 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 SNTNA6NMZ2 147 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 COQ9O75208 318 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 GUCY1B2O75343 617 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 IGFBP1P08833 259 aaPredicted RBP13.5□□□□□ -0.25
CD48-201ENST00000368045 CKMT1AP12532 417 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 TEAD1P28347 426 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 GPC1P35052 558 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 SSR2P43308 183 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 SLC6A11P48066 632 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 ARFIP1P53367 373 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 CSNK1G2P78368 415 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 CDK3Q00526 305 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 DOC2BQ14184 412 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 SYPL1Q16563 259 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 AGAP6Q5VW22 663 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 KIAA1161Q6NSJ0 714 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 C1orf94Q6P1W5 598 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 TMPRSS11AQ6ZMR5 421 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 PHC2Q8IXK0 858 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 GJD3Q8N144 294 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 CLDN22Q8N7P3 220 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 OR4K5Q8NGD3 323 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 SUN3Q8TAQ9 357 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 SPPL3Q8TCT6 385 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 CREB3L4Q8TEY5 395 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 CAMK1GQ96NX5 476 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 AGAP4Q96P64 663 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 DPH7Q9BTV6 452 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 GLIPR2Q9H4G4 154 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 FBXL12Q9NXK8 326 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 TVP23BQ9NYZ1 205 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 TESQ9UGI8 421 aaKnown RBP13.5□□□□□ -0.25
CD48-201ENST00000368045 CAB39Q9Y376 341 aaPredicted RBP13.5□□□□□ -0.25
CD48-201ENST00000368045 PCDHGB2Q9Y5G2 931 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 BRCA2P51587 3418 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 A0A0G2JPF8 293 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 PRAMEF27A3QJZ7 478 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 HNRNPCL2B2RXH8 293 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 HNRNPCL3B7ZW38 293 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms