RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TNFRSF13CQ96RJ3 184 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 PAK5Q9P286 719 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 RNF112Q9ULX5 631 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 LIPT1Q9Y234 373 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 MAGED1Q9Y5V3 778 aaPredicted RBP13.24□□□□□ -0.29
VAMP4-202ENST00000367740 COMMD10Q9Y6G5 202 aa13.24□□□□□ -0.29
VAMP4-202ENST00000367740 EGR1P18146 543 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 STARP49675 285 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 RGS4P49798 205 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 GFRA1P56159 465 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 SIRPAP78324 504 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 GPS1Q13098 491 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 THOC6Q86W42 341 aaKnown RBP13.23□□□□□ -0.29
VAMP4-202ENST00000367740 TRIM42Q8IWZ5 723 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 OR4N5Q8IXE1 308 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 OR1J4Q8NGS1 313 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 LINGO1Q96FE5 620 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 KRT12Q99456 494 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 MAPKAP1Q9BPZ7 522 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 KLHL4Q9C0H6 718 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 REXO4Q9GZR2 422 aaKnown RBP13.23□□□□□ -0.29
VAMP4-202ENST00000367740 L2HGDHQ9H9P8 463 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 COPS7BQ9H9Q2 264 aaPredicted RBP13.23□□□□□ -0.29
VAMP4-202ENST00000367740 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.23□□□□□ -0.29
VAMP4-202ENST00000367740 GDF2Q9UK05 429 aaPredicted RBP13.23□□□□□ -0.29
VAMP4-202ENST00000367740 DLGAP4Q9Y2H0 992 aa13.23□□□□□ -0.29
VAMP4-202ENST00000367740 AP3B1O00203 1094 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 GUCA1CO95843 209 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 CLPSP04118 112 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 TBXA2RP21731 343 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 IGFBP5P24593 272 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 GMPRP36959 345 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 CLDN18P56856 261 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 SLC37A1P57057 533 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 HERVK_113P63132 956 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 ERVK-8P63133 956 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 KBTBD12Q3ZCT8 623 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 OR2A2Q6IF42 318 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 ADNP2Q6IQ32 1131 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 ADAM5Q6NVV9 412 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 PAQR3Q6TCH7 311 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 ANGPTL8Q6UXH0 198 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 C12orf54Q6X4T0 127 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 ZNF793Q6ZN11 406 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 RNF111Q6ZNA4 994 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 P4HA3Q7Z4N8 544 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 VN1R5Q7Z5H4 357 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 TAGAPQ8N103 731 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 ZNF610Q8N9Z0 462 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 TTLQ8NG68 377 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 RAB3IL1Q8TBN0 382 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 ZNF845Q96IR2 970 aaPredicted RBP13.22□□□□□ -0.29
VAMP4-202ENST00000367740 NDNQ99608 321 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 ERVK-6Q9BXR3 956 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 OR2B2Q9GZK3 357 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 LYRM4Q9HD34 91 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 PRDM7Q9NQW5 492 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 WWOXQ9NZC7 414 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 ERVK-19Q9WJR5 959 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 SLC22A14Q9Y267 594 aa13.22□□□□□ -0.29
VAMP4-202ENST00000367740 CAPN14A8MX76 684 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 UBFD1O14562 309 aaKnown RBP13.21□□□□□ -0.29
VAMP4-202ENST00000367740 DYRK3O43781 588 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 OR10H2O60403 315 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 CLEC3AO75596 197 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 HAUS5O94927 633 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 CD8BP10966 210 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 ZNF708P17019 499 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 BASP1P80723 227 aaKnown RBP13.21□□□□□ -0.29
VAMP4-202ENST00000367740 PLIN5Q00G26 463 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 LOXL1Q08397 574 aaPredicted RBP13.21□□□□□ -0.29
VAMP4-202ENST00000367740 PDLIM3Q53GG5 364 aaPredicted RBP13.21□□□□□ -0.29
VAMP4-202ENST00000367740 LIPNQ5VXI9 398 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 CASC4Q6P4E1 433 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 TMIGD1Q6UXZ0 262 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 CCDC89Q8N998 374 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 LRRC57Q8N9N7 239 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 OR14L1PQ8NHC6 308 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 FBXW5Q969U6 566 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 HS6ST2Q96MM7 605 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 RHNO1Q9BSD3 238 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 SERHLQ9NQF3 203 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 PACSIN2Q9UNF0 486 aaPredicted RBP13.21□□□□□ -0.29
VAMP4-202ENST00000367740 MAD1L1Q9Y6D9 718 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 KCNE2Q9Y6J6 123 aa13.21□□□□□ -0.29
VAMP4-202ENST00000367740 IQANK1A0A1B0GTG1 560 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 FAM234BA2RU67 622 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 PABPN1LA6NDY0 278 aaKnown RBP13.2□□□□□ -0.3
VAMP4-202ENST00000367740 SLC22A20A6NK97 555 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 OR6C76A6NM76 312 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 CDC7O00311 574 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 EMC8O43402 210 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 LMX1BO60663 402 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 PPP3CBP16298 524 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 GSTM2P28161 218 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 TMED10P49755 219 aaKnown RBP13.2□□□□□ -0.3
VAMP4-202ENST00000367740 FAPQ12884 760 aa13.2□□□□□ -0.3
VAMP4-202ENST00000367740 THOC5Q13769 683 aaKnown RBP13.2□□□□□ -0.3
VAMP4-202ENST00000367740 DHX34Q14147 1143 aaKnown RBP13.2□□□□□ -0.3
VAMP4-202ENST00000367740 SLBPQ14493 270 aaKnown RBP eCLIP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms