RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 HSPB11Q9Y547 144 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 SYN1P17600 705 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 COMMD6Q7Z4G1 85 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 CPXM2Q8N436 756 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 DMRTB1Q96MA1 342 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 METTL8Q9H825 291 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 UBQLN2Q9UHD9 624 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 SPO11Q9Y5K1 396 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 VSTM5A8MXK1 200 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 CCL5P13501 91 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 ITGB7P26010 798 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 GLP1RP43220 463 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 GATMP50440 423 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 ARHGAP40Q5TG30 622 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 PGBD2Q6P3X8 592 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 LCTLQ6UWM7 567 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 GATA6Q92908 595 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 C7orf50Q9BRJ6 194 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 WNT6Q9Y6F9 365 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 KIAA0513O60268 411 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 TMEM69Q5SWH9 247 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 LRR1Q96L50 414 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 CDCA3Q99618 268 aaPredicted RBP11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 ENPP5Q9UJA9 477 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 GPR34Q9UPC5 381 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 PGAM2P15259 253 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 ARSDP51689 593 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 SLAMF1Q13291 335 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 TDGQ13569 410 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 RNASE12Q5GAN4 147 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 GPRIN1Q7Z2K8 1008 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 OR5L2Q8NGL0 311 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 PHOSPHO1Q8TCT1 267 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 HYLS1Q96M11 299 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 IQCF3P0C7M6 154 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 OR12D1P0DN82 309 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 CNIH3Q8TBE1 160 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 FEVQ99581 238 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 HAPLN2Q9GZV7 340 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 MALT1Q9UDY8 824 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 FRKP42685 505 aaPredicted RBP11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 OR4D2P58180 307 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 MICAQ29983 383 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 NKD1Q969G9 470 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 KLHDC7BQ96G42 594 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 P2RY13Q9BPV8 354 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 RXFP3Q9NSD7 469 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 IL17CQ9P0M4 197 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 TRAPPC13A5PLN9 417 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 RFPL2O75678 378 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 ARF5P84085 180 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 CYCSP99999 105 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 DNASE1L3Q13609 305 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 DTWD1Q8N5C7 304 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 OR52P1PQ8NH57 321 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 YIPF4Q9BSR8 244 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 PTTG3PQ9NZH4 202 aa11.49□□□□□ -0.57
CDC42BPA-203ENST00000366766 A0A075B6Q4 140 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 TCTE1Q5JU00 501 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 ZNF280BQ86YH2 543 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 POLDIP3Q9BY77 421 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 CSTAP01040 98 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 T-ENOLP0DO92 83 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 UBL4AP11441 157 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 SELENOWP63302 87 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 PSAPL1Q6NUJ1 521 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 PAPD5Q8NDF8 572 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 RBBP9O75884 186 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 RHOP08100 348 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 CCND3P30281 292 aaPredicted RBP11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 RAB40BQ12829 278 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 SMARCD2Q92925 531 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 CENPBD1B2RD01 187 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 PRAF2O60831 178 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 RORAP35398 523 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 RPS3AP61247 264 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 PKDCCQ504Y2 493 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 UGT2A3Q6UWM9 527 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 CCDC28AQ8IWP9 274 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 SLC25A36Q96CQ1 311 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 NELL2Q99435 816 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 PINK1Q9BXM7 581 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 FARS2O95363 451 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 PLAG1Q6DJT9 500 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 OR4C11Q6IEV9 310 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 OR2T4Q8NH00 348 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 GLS2Q9UI32 602 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 CKAP5Q14008 2032 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 WNT4P56705 351 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 SERTAD2Q14140 314 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 UBQLNLQ8IYU4 475 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 SLC7A13Q8TCU3 470 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 NUP50Q9UKX7 468 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 KCNIP3Q9Y2W7 256 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 NOP16Q9Y3C1 178 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 GPR45Q9Y5Y3 372 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 DOCK5Q9H7D0 1870 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 MROH6A6NGR9 719 aa11.48□□□□□ -0.57
CDC42BPA-203ENST00000366766 PNMTP11086 282 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms