RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 RAB33BQ9H082 229 aa4.14□□□□□ -1.75
RPL39-201ENST00000361575 PALMDQ9NP74 551 aa4.14□□□□□ -1.75
RPL39-201ENST00000361575 SPHK2Q9NRA0 654 aa4.14□□□□□ -1.75
RPL39-201ENST00000361575 NLGN3Q9NZ94 848 aa4.14□□□□□ -1.75
RPL39-201ENST00000361575 BCAP29Q9UHQ4 241 aa4.14□□□□□ -1.75
RPL39-201ENST00000361575 PROCRQ9UNN8 238 aa4.14□□□□□ -1.75
RPL39-201ENST00000361575 MRPS28Q9Y2Q9 187 aaKnown RBP4.14□□□□□ -1.75
RPL39-201ENST00000361575 ZHX2Q9Y6X8 837 aa4.14□□□□□ -1.75
RPL39-201ENST00000361575 ATAD2BQ9ULI0 1458 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 MEX3AA1L020 520 aaKnown RBP4.13□□□□□ -1.75
RPL39-201ENST00000361575 TRIM49BA6NDI0 452 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 ANKRD30BLA7E2S9 258 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 E9PMD0 336 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 SGK494L7N484 410 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 ZSCAN5DPP0CG00 497 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 PDHA2P29803 388 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 SOX6P35712 828 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 KRTAP10-11P60412 298 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 NFATC2Q13469 925 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 GCKRQ14397 625 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 SGSM1Q2NKQ1 1148 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 HLA-BQ31612 363 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 ANKRD55Q3KP44 614 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 TMEM41BQ5BJD5 291 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 WDR25Q64LD2 544 aaPredicted RBP4.13□□□□□ -1.75
RPL39-201ENST00000361575 RHBDD2Q6NTF9 364 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 SLC39A4Q6P5W5 647 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 CES3Q6UWW8 571 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 C3P1Q6ZMU1 363 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 ASRGL1Q7L266 308 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 GOLGA7Q7Z5G4 137 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 ZER1Q7Z7L7 766 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 KCNMB4Q86W47 210 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 FADS6Q8N9I5 356 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 MLKLQ8NB16 471 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 ZNRF1Q8ND25 227 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 WDR36Q8NI36 951 aaKnown RBP4.13□□□□□ -1.75
RPL39-201ENST00000361575 ZNF519Q8TB69 540 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 KRT12Q99456 494 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 WRAP53Q9BUR4 548 aaKnown RBP4.13□□□□□ -1.75
RPL39-201ENST00000361575 FICDQ9BVA6 458 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 NACA2Q9H009 215 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 BAIAP2L1Q9UHR4 511 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 ZNF580Q9UK33 172 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 ZNF490Q9ULM2 529 aaPredicted RBP4.13□□□□□ -1.75
RPL39-201ENST00000361575 LRP12Q9Y561 859 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 KDRP35968 1356 aa4.13□□□□□ -1.75
RPL39-201ENST00000361575 MPTX1A8MV57 137 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 H3BMH7 237 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 NR5A2O00482 541 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 SDHDO14521 159 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 BUB1O43683 1085 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 MTRF1O75570 445 aaKnown RBP4.12□□□□□ -1.75
RPL39-201ENST00000361575 OR4F21O95013 312 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 PRAMEF12O95522 483 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 OAS1P00973 400 aaKnown RBP4.12□□□□□ -1.75
RPL39-201ENST00000361575 PCCBP05166 539 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 CALCBP10092 127 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 MBL2P11226 248 aaPredicted RBP4.12□□□□□ -1.75
RPL39-201ENST00000361575 DRD5P21918 477 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 PRKACGP22612 351 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 PPP2R1AP30153 589 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 PTGFRP43088 359 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 SLC1A6P48664 564 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 HNMTP50135 292 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 NDST2P52849 883 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 CRYBA2P53672 197 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 TMEM187Q14656 261 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 USH1GQ495M9 461 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 TCHHL1Q5QJ38 904 aaPredicted RBP4.12□□□□□ -1.75
RPL39-201ENST00000361575 USP43Q70EL4 1123 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 LHFPL4Q7Z7J7 247 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 CARM1Q86X55 608 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 UNC5CLQ8IV45 518 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 GCNT2Q8N0V5 402 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 OR10G7Q8NGN6 311 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 OR1K1Q8NGR3 316 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 C4orf36Q96KX1 117 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 ALKBH3Q96Q83 286 aaPredicted RBP4.12□□□□□ -1.75
RPL39-201ENST00000361575 TXN2Q99757 166 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 RBM24Q9BX46 236 aaKnown RBP4.12□□□□□ -1.75
RPL39-201ENST00000361575 DGCR6LQ9BY27 220 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 MED20Q9H944 212 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 FGF22Q9HCT0 170 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 TEX10Q9NXF1 929 aaPredicted RBP4.12□□□□□ -1.75
RPL39-201ENST00000361575 GTSE1Q9NYZ3 720 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 THAP10Q9P2Z0 257 aaPredicted RBP4.12□□□□□ -1.75
RPL39-201ENST00000361575 IKZF3Q9UKT9 509 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 B9D1Q9UPM9 204 aa4.12□□□□□ -1.75
RPL39-201ENST00000361575 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.12□□□□□ -1.75
RPL39-201ENST00000361575 TCF20Q9UGU0 1960 aaKnown RBP4.12□□□□□ -1.75
RPL39-201ENST00000361575 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.11□□□□□ -1.75
RPL39-201ENST00000361575 EME2A4GXA9 379 aaPredicted RBP4.11□□□□□ -1.75
RPL39-201ENST00000361575 H0YL77 283 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 IMPA2O14732 288 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 INPP4BO15327 924 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 ZNF749O43361 778 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 ZNF821O75541 412 aaPredicted RBP4.11□□□□□ -1.75
RPL39-201ENST00000361575 TOXO94900 526 aa4.11□□□□□ -1.75
RPL39-201ENST00000361575 NXPH2O95156 264 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms