RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 SLC22A25Q6T423 547 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 MMAAQ8IVH4 418 aaKnown RBP8.92□□□□□ -0.98
VPS13A-203ENST00000360280 TMEM185AQ8NFB2 350 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 CNIH3Q8TBE1 160 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 SFXN5Q8TD22 340 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 PRRT1Q99946 306 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 PRODH2Q9UF12 536 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 LIPT1Q9Y234 373 aa8.92□□□□□ -0.98
VPS13A-203ENST00000360280 IFT172Q9UG01 1749 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 NIPSNAP2O75323 286 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 TNFP01375 233 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 CAP1Q01518 475 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 HACD2Q6Y1H2 254 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 WFIKKN2Q8TEU8 576 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 MAL2Q969L2 176 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 TAAR8Q969N4 342 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 SPATA31D1Q6ZQQ2 1576 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 KRBOX1C9JBD0 128 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 C11orf98E9PRG8 122 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 SOX2P48431 317 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 TAS2R30P59541 319 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 MRPS10P82664 201 aaKnown RBP8.91□□□□□ -0.98
VPS13A-203ENST00000360280 WDR45BQ5MNZ6 344 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 PHF19Q5T6S3 580 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 PRSS48Q7RTY5 328 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 ARFGEF2Q9Y6D5 1785 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 TRBV23OR9-2A0A075B6M9 112 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 MTMR11A4FU01 709 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 UGT2B7P16662 529 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 AQP2P41181 271 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 TSFMP43897 325 aaKnown RBP8.91□□□□□ -0.98
VPS13A-203ENST00000360280 MTNR1AP48039 350 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 NR0B1P51843 470 aaKnown RBP8.91□□□□□ -0.98
VPS13A-203ENST00000360280 HMGCS1Q01581 520 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 LRP8Q14114 963 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 PCGF3Q3KNV8 242 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 CNTNAP3Q9BZ76 1288 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 EDDM13A0A1B0GTR0 161 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 SLC31A1O15431 190 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF8P17098 575 aaPredicted RBP8.91□□□□□ -0.98
VPS13A-203ENST00000360280 NR4A2P43354 598 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 RPL23AP62750 156 aaKnown RBP8.91□□□□□ -0.98
VPS13A-203ENST00000360280 CCNJQ5T5M9 372 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 CFAP77Q6ZQR2 320 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 KCTD20Q7Z5Y7 419 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 OR6C4Q8NGE1 309 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 ELMOD3Q96FG2 381 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 FCRL5Q96RD9 977 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 DIRAS1O95057 198 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 PRSS3P35030 304 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 GCGRP47871 477 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 CAMK2DQ13557 499 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 VWA5B2Q8N398 1253 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 FNDC9Q8TBE3 224 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 NT5C3BQ969T7 300 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 SPTSSAQ969W0 71 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 SNX18Q96RF0 628 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 C17orf62Q9BQA9 187 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 TTTY10Q9BZA0 68 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 C2orf42Q9NWW7 574 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 TOR1AO14656 332 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 EBLN1P0CF75 366 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 ARHGAP40Q5TG30 622 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 GDPD4Q6W3E5 623 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 OR10T2Q8NGX3 314 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 ACSL6Q9UKU0 697 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 SPATA31A1Q5TZJ5 1347 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 A0A0G2JN53 185 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 AGAP14A8MT82 685 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 OR7A17O14581 309 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 GAAP10253 952 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 CD9P21926 228 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 FOXK1P85037 733 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 PCLAFQ15004 111 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 NAT8LQ8N9F0 302 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 OR13J1Q8NGT2 312 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 ADAMTS19Q8TE59 1207 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 UPRTQ96BW1 309 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 ACOT13Q9NPJ3 140 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 SIRPGQ9P1W8 387 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 WNT10BO00744 389 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 PRKCAP17252 672 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 SCNN1AP37088 669 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 THBS3P49746 956 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 GK3PQ14409 553 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 KIAA1211LQ6NV74 962 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 KLBQ86Z14 1044 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 KCTD13Q8WZ19 329 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF696Q9H7X3 374 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 SNCGO76070 127 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 DPY19L2P1Q6NXN4 242 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 TSSK4Q6SA08 328 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 SLC24A5Q71RS6 500 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 NOXA1Q86UR1 476 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 TMEM173Q86WV6 379 aaPredicted RBP8.91□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF440Q8IYI8 595 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 OR4K14Q8NGD5 310 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 ABCC6O95255 1503 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 PTPRMP28827 1452 aa8.91□□□□□ -0.98
VPS13A-203ENST00000360280 CCINQ13939 588 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms