RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 GFERP55789 205 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 SELENOWP63302 87 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 LRRC23Q53EV4 343 aaPredicted RBP12.7□□□□□ -0.38
CCDC197-201ENST00000359253 COX20Q5RI15 118 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 SWT1Q5T5J6 900 aaKnown RBP12.7□□□□□ -0.38
CCDC197-201ENST00000359253 HMBOX1Q6NT76 420 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 TLDC1Q6P9B6 456 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 ZCCHC12Q6PEW1 402 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 ZBTB49Q6ZSB9 765 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 PIWIL3Q7Z3Z3 882 aaKnown RBP12.7□□□□□ -0.38
CCDC197-201ENST00000359253 SPRED1Q7Z699 444 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 GLRX5Q86SX6 157 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 ZNF595Q8IYB9 648 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 SVOPLQ8N434 492 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 OR5AK3PQ8NH89 298 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 RHBDD1Q8TEB9 315 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 ELP4Q96EB1 424 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 SPATA5L1Q9BVQ7 753 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 FANCEQ9HB96 536 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 IL1RAPQ9NPH3 570 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 C5AR2Q9P296 337 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 P2RX2Q9UBL9 471 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 CDC14AQ9UNH5 594 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 CLCA2Q9UQC9 943 aa12.7□□□□□ -0.38
CCDC197-201ENST00000359253 GLOD5A6NK44 160 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 CLDN4O14493 209 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 ATP1B1P05026 303 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 ANKRD34CP0C6C1 535 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 CDK4P11802 303 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 CPMP14384 443 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 UQCRBP14927 111 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 MATN1P21941 496 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 SOX11P35716 441 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 FEN1P39748 380 aaKnown RBP12.69□□□□□ -0.38
CCDC197-201ENST00000359253 ID4P47928 161 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 ARSFP54793 590 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 PCBP3P57721 371 aaKnown RBP12.69□□□□□ -0.38
CCDC197-201ENST00000359253 GK3PQ14409 553 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 LRRC36Q1X8D7 754 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 AMIGO2Q86SJ2 522 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 ARMC8Q8IUR7 673 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 OR2I1PQ8NGU4 316 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 SDCCAG3Q96C92 435 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 ZNF607Q96SK3 696 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 DOHHQ9BU89 302 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 ZNF768Q9H5H4 540 aaKnown RBP12.69□□□□□ -0.38
CCDC197-201ENST00000359253 CALML5Q9NZT1 146 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 PDP2Q9P2J9 529 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 ZNF639Q9UID6 485 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 SERTAD3Q9UJW9 196 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 ACSL6Q9UKU0 697 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 LIPT1Q9Y234 373 aa12.69□□□□□ -0.38
CCDC197-201ENST00000359253 GNGT2O14610 69 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 CHST10O43529 356 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 DENRO43583 198 aaKnown RBP12.68□□□□□ -0.38
CCDC197-201ENST00000359253 KIF1CO43896 1103 aaKnown RBP12.68□□□□□ -0.38
CCDC197-201ENST00000359253 CTNSO60931 367 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 CBFA2T3O75081 653 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 SERPINB7O75635 380 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 CPNE6O95741 557 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 ZNF682O95780 498 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 CST1P01037 141 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 SEMG1P04279 462 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 FABP3P05413 133 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 NUDT7P0C024 238 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 TFPTP0C1Z6 253 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 SLC35E2P0CK97 266 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 ITGA2P17301 1181 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 NELFEP18615 380 aaKnown RBP12.68□□□□□ -0.38
CCDC197-201ENST00000359253 ARHGDIAP52565 204 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 DEFB110Q30KQ9 67 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 CYBRD1Q53TN4 286 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 SFT2D3Q587I9 215 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 NKAIN2Q5VXU1 208 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 ENPP6Q6UWR7 440 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 NAXDQ8IW45 347 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 ZC3H7AQ8IWR0 971 aaKnown RBP12.68□□□□□ -0.38
CCDC197-201ENST00000359253 KBTBD2Q8IY47 623 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 GPR135Q8IZ08 494 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 LGI4Q8N135 537 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 CLEC4FQ8N1N0 589 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 NUP43Q8NFH3 380 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 NFKBIDQ8NI38 313 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 ZNF675Q8TD23 568 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 UCN3Q969E3 161 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 CCDC74AQ96AQ1 378 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 NRBF2Q96F24 287 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 ZNF597Q96LX8 424 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 ZNF578Q96N58 590 aaPredicted RBP12.68□□□□□ -0.38
CCDC197-201ENST00000359253 RDH12Q96NR8 316 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 NR1H4Q96RI1 486 aaPredicted RBP12.68□□□□□ -0.38
CCDC197-201ENST00000359253 ZNF347Q96SE7 839 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 PELOQ9BRX2 385 aaKnown RBP12.68□□□□□ -0.38
CCDC197-201ENST00000359253 OSBPL11Q9BXB4 747 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 SEMA6AQ9H2E6 1030 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 COQ10BQ9H8M1 238 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 BCL2L10Q9HD36 194 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 IRAK4Q9NWZ3 460 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 GIN1Q9NXP7 522 aa12.68□□□□□ -0.38
CCDC197-201ENST00000359253 PADI2Q9Y2J8 665 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms