RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 KDM1BQ8NB78 822 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 ZNF439Q8NDP4 499 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 THAP4Q8WY91 577 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 WDR92Q96MX6 357 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 ZNF75AQ96N20 296 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 RBM4BQ9BQ04 359 aaKnown RBP5.56□□□□□ -1.52
BRCA1-203ENST00000357654 RBM4Q9BWF3 364 aaKnown RBP5.56□□□□□ -1.52
BRCA1-203ENST00000357654 AMBNQ9NP70 447 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 AGPAT4Q9NRZ5 378 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 SIDT1Q9NXL6 827 aaKnown RBP5.56□□□□□ -1.52
BRCA1-203ENST00000357654 EURLQ9NYK6 297 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 SMIM28A0A1B0GU29 152 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 RNASEK-C17orf49H0YIS7 233 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 TLR4O00206 839 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 MANBAO00462 879 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 CTDNEP1O95476 244 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 APEHP13798 732 aaKnown RBP5.56□□□□□ -1.52
BRCA1-203ENST00000357654 KITLGP21583 273 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 GIFP27352 417 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 SHMT1P34896 483 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 VIPR2P41587 438 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 KIR2DL3P43628 341 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 CAMLGP49069 296 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 RORCP51449 518 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 AIF1P55008 147 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 ADAM17P78536 824 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 KCNC3Q14003 757 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 IL17AQ16552 155 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 FAM174BQ3ZCQ3 159 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 LY6G5CQ5SRR4 150 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 CEACAM20Q6UY09 585 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 MAMDC2Q7Z304 686 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-203ENST00000357654 BATF2Q8N1L9 274 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 C1orf52Q8N6N3 182 aaKnown RBP5.56□□□□□ -1.52
BRCA1-203ENST00000357654 SPTSSAQ969W0 71 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 HSFY1Q96LI6 401 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 TCF12Q99081 682 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 S1PR3Q99500 378 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 ZNF559Q9BR84 538 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 TPT1P8Q9HAU6 139 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 XPNPEP1Q9NQW7 623 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 TMEM184CQ9NVA4 438 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 RNF186Q9NXI6 227 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 PCDHGA11Q9Y5H2 935 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 WTIPA6NIX2 430 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-203ENST00000357654 E7ENQ6 273 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 AIREO43918 545 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 RCBTB2O95199 551 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 KCNK5O95279 499 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 TGM6O95932 706 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 RNF224P0DH78 156 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 ETS2P15036 469 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 RAB13P51153 203 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 CAV2P51636 162 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 AKR1C1Q04828 323 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 TYSND1Q2T9J0 566 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 DEFB134Q4QY38 66 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 PRAMEF8Q5VWM4 474 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 PRAMEF7Q5VXH5 474 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 SLC22A25Q6T423 547 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 ZNF783Q6ZMS7 281 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 ASRGL1Q7L266 308 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 TAC4Q86UU9 113 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 ZDHHC21Q8IVQ6 265 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 PRR7Q8TB68 274 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 CPXM1Q96SM3 734 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 NUDT22Q9BRQ3 303 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 TMEM134Q9H6X4 195 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 PAK6Q9NQU5 681 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-203ENST00000357654 CUTCQ9NTM9 273 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 OBP2AQ9NY56 170 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 NDUFA13Q9P0J0 144 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 PRODH2Q9UF12 536 aa5.56□□□□□ -1.52
BRCA1-203ENST00000357654 AGAP5A6NIR3 686 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 GABARAPH6UMI1 98 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 CXCR6O00574 342 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 LSM1O15116 133 aaKnown RBP5.55□□□□□ -1.52
BRCA1-203ENST00000357654 LRCH4O75427 683 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 USP2O75604 605 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-203ENST00000357654 GABARAPO95166 117 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 ATP6V1G2O95670 118 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 PRLP01236 227 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 OR8U9P0C7N5 309 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 EIF2DP41214 584 aaKnown RBP5.55□□□□□ -1.52
BRCA1-203ENST00000357654 F2RL1P55085 397 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 RAB33AQ14088 237 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 PTPRRQ15256 657 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 OR7A5Q15622 319 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 ASTE1Q2TB18 679 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-203ENST00000357654 SLC25A52Q3SY17 297 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 DACT2Q5SW24 774 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 AKR1C8PQ5T2L2 129 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 FAM69AQ5T7M9 428 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 KIAA1958Q8N8K9 716 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 NOA1Q8NC60 698 aaKnown RBP5.55□□□□□ -1.52
BRCA1-203ENST00000357654 RAB8BQ92930 207 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 S100A16Q96FQ6 103 aaKnown RBP5.55□□□□□ -1.52
BRCA1-203ENST00000357654 RDH12Q96NR8 316 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 LMF1Q96S06 567 aa5.55□□□□□ -1.52
BRCA1-203ENST00000357654 WACQ9BTA9 647 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms