RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.12□□□□□ -0.79
CAPN3-205ENST00000357568 PLEKHS1Q5SXH7 462 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 NDUFAF5Q5TEU4 345 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 CD276Q5ZPR3 534 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 GPR139Q6DWJ6 353 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 C22orf42Q6IC83 251 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 ANKRD54Q6NXT1 300 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 MAMSTRQ6ZN01 415 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 ADGRG3Q86Y34 549 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 CFAP52Q8N1V2 620 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 LRRC17Q8N6Y2 441 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 OR52I1Q8NGK6 324 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 UFD1Q92890 307 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 MTERF3Q96E29 417 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 SORCS2Q96PQ0 1159 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.12□□□□□ -0.79
CAPN3-205ENST00000357568 GPATCH2Q9NW75 528 aa10.12□□□□□ -0.79
CAPN3-205ENST00000357568 TNRC18O15417 2968 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-205ENST00000357568 TRBC2A0A5B9 178 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 TRIM77I1YAP6 450 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 KPNA5O15131 536 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 PRAMEF4O60810 478 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 CD160O95971 181 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 FHP07954 510 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 OR4Q2P0C623 313 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 CTSAP10619 480 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 APEX1P27695 318 aaKnown RBP10.11□□□□□ -0.79
CAPN3-205ENST00000357568 CRATP43155 626 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 XKP51811 444 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 EPHA4P54764 986 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 RAE1P78406 368 aaKnown RBP10.11□□□□□ -0.79
CAPN3-205ENST00000357568 ACSM1Q08AH1 577 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 RAB40BQ12829 278 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 PDE7AQ13946 482 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 MRPL58Q14197 206 aaKnown RBP10.11□□□□□ -0.79
CAPN3-205ENST00000357568 ZXDCQ2QGD7 858 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-205ENST00000357568 PRAMEF9Q5VWM5 478 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 TMEM173Q86WV6 379 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-205ENST00000357568 NFKBIDQ8NI38 313 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 FGF11Q92914 225 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 PRRG3Q9BZD7 231 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 ZNF576Q9H609 170 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 ZNF275Q9NSD4 429 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-205ENST00000357568 NLKQ9UBE8 527 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 NCKAP1Q9Y2A7 1128 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 FNDC3AQ9Y2H6 1198 aaKnown RBP10.11□□□□□ -0.79
CAPN3-205ENST00000357568 PCDHB9Q9Y5E1 797 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 BACE2Q9Y5Z0 518 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 IRAK3Q9Y616 596 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 PRAMEF33A0A0G2JMD5 474 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 A0A1B0GVI7 797 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 GPR39O43194 453 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 CHP2O43745 196 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 PRAMEF10O60809 474 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 SOCS5O75159 536 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 CLEC2LP0C7M8 214 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 ETFAP13804 333 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 TIA1P31483 386 aaKnown RBP eCLIP10.11□□□□□ -0.79
CAPN3-205ENST00000357568 OR1E2P47887 323 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 INPP1P49441 399 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 RAG2P55895 527 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 IRF8Q02556 426 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 GRK1Q15835 563 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 TJAP1Q5JTD0 557 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 ZNF648Q5T619 568 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-205ENST00000357568 ZNF697Q5TEC3 545 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 SDHAF4Q5VUM1 108 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 ANKS3Q6ZW76 656 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 PDZD3Q86UT5 571 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.11□□□□□ -0.79
CAPN3-205ENST00000357568 LRRC56Q8IYG6 542 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-205ENST00000357568 CLDN19Q8N6F1 224 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 HUS1BQ8NHY5 278 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 ADAMTS19Q8TE59 1207 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 ZNF431Q8TF32 576 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-205ENST00000357568 HASPINQ8TF76 798 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 SCMH1Q96GD3 660 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 LYSMD1Q96S90 227 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 ATF6BQ99941 703 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 VN1R3Q9BXE9 311 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 GPR62Q9BZJ7 368 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 REEP4Q9H6H4 257 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 ZNF304Q9HCX3 659 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 DNAJC27Q9NZQ0 273 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 ACAD8Q9UKU7 415 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 VWA8A3KMH1 1905 aa10.11□□□□□ -0.79
CAPN3-205ENST00000357568 MGAT4DA6NG13 374 aa10.1□□□□□ -0.79
CAPN3-205ENST00000357568 HEPACAM2A8MVW5 462 aa10.1□□□□□ -0.79
CAPN3-205ENST00000357568 CBX4O00257 560 aa10.1□□□□□ -0.79
CAPN3-205ENST00000357568 BTN3A3O00478 584 aa10.1□□□□□ -0.79
CAPN3-205ENST00000357568 SH3BP5O60239 455 aa10.1□□□□□ -0.79
CAPN3-205ENST00000357568 RECKO95980 971 aa10.1□□□□□ -0.79
CAPN3-205ENST00000357568 DHFRP00374 187 aa10.1□□□□□ -0.79
CAPN3-205ENST00000357568 OPN1SWP03999 348 aa10.1□□□□□ -0.79
CAPN3-205ENST00000357568 URODP06132 367 aa10.1□□□□□ -0.79
CAPN3-205ENST00000357568 ANXA4P09525 319 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-205ENST00000357568 POU3F3P20264 500 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-205ENST00000357568 EVI2BP34910 448 aa10.1□□□□□ -0.79
CAPN3-205ENST00000357568 TGM4P49221 684 aa10.1□□□□□ -0.79
CAPN3-205ENST00000357568 SNRPD2P62316 118 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms