RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 MCEMP1Q8IX19 187 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 ULK2Q8IYT8 1036 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 NAGSQ8N159 534 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 KRT78Q8N1N4 520 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 FNDC5Q8NAU1 212 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 OR2L8Q8NGY9 312 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 OR2T11Q8NH01 316 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 SLC5A11Q8WWX8 675 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 SLC22A18Q96BI1 424 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 TESCQ96BS2 214 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 C11orf24Q96F05 449 aaPredicted RBP6.58□□□□□ -1.36
VPS13A-201ENST00000355766 C3orf30Q96M34 536 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 C8orf49Q96NF6 230 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 KCNA7Q96RP8 456 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 ZBTB18Q99592 522 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 MENTQ9BUN1 341 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 ULBP3Q9BZM4 244 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 LRTM1Q9HBL6 345 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 POT1Q9NUX5 634 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 GID8Q9NWU2 228 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 SIDT1Q9NXL6 827 aaKnown RBP6.58□□□□□ -1.36
VPS13A-201ENST00000355766 LUZP4Q9P127 313 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 ZNHIT2Q9UHR6 403 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 MOSPD1Q9UJG1 213 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 FBXL7Q9UJT9 491 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 KCND3Q9UK17 655 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 SUFUQ9UMX1 484 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 TMEM98Q9Y2Y6 226 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 PCDHGA6Q9Y5G7 932 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 HIVEP1P15822 2718 aa6.58□□□□□ -1.36
VPS13A-201ENST00000355766 MED13Q9UHV7 2174 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 SHANK1Q9Y566 2161 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 ATP6AP2A0A1C7CYW4 349 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 PIPSLA2A3N6 862 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 A8MU76 341 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 ANKRD28O15084 1053 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 SMAD7O15105 426 aaKnown RBP6.57□□□□□ -1.36
VPS13A-201ENST00000355766 DPM1O60762 260 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 CREG1O75629 220 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 ATP6AP2O75787 350 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 MYO1DO94832 1006 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 C1GALT1C1LP0DN25 315 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 F3P13726 295 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 NPPBP16860 134 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 ZNF28P17035 718 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 TNFRSF1AP19438 455 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 ITGAXP20702 1163 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 PRPS1L1P21108 318 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 AK4P27144 223 aaPredicted RBP6.57□□□□□ -1.36
VPS13A-201ENST00000355766 PBLDP30039 288 aaPredicted RBP6.57□□□□□ -1.36
VPS13A-201ENST00000355766 HOXC12P31275 282 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 ECI1P42126 302 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 GDF5P43026 501 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 TSFMP43897 325 aaKnown RBP6.57□□□□□ -1.36
VPS13A-201ENST00000355766 FASLGP48023 281 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 NUDT2P50583 147 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 ACTR3P61158 418 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 MXRA7P84157 204 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 REEP5Q00765 189 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 ART3Q13508 389 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 CUL3Q13618 768 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 DOC2AQ14183 400 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 KIAA0040Q15053 153 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 SF1Q15637 639 aaKnown RBP6.57□□□□□ -1.36
VPS13A-201ENST00000355766 AP5B1Q2VPB7 878 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 XKR6Q5GH73 641 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 SAMD4BQ5PRF9 694 aaKnown RBP6.57□□□□□ -1.36
VPS13A-201ENST00000355766 IRAK1BP1Q5VVH5 260 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 AAGABQ6PD74 315 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 SLC30A9Q6PML9 568 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 WDR74Q6RFH5 385 aaPredicted RBP6.57□□□□□ -1.36
VPS13A-201ENST00000355766 CYP20A1Q6UW02 462 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 CAMKMTQ7Z624 323 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 C17orf64Q86WR6 236 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 ZNF227Q86WZ6 799 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 SCUBE1Q8IWY4 988 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 SFRP1Q8N474 314 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 KIF2BQ8N4N8 673 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 TBC1D19Q8N5T2 526 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 LILRA3Q8N6C8 439 aaPredicted RBP6.57□□□□□ -1.36
VPS13A-201ENST00000355766 NATD1Q8N6N6 113 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 ENDOVQ8N8Q3 282 aaKnown RBP6.57□□□□□ -1.36
VPS13A-201ENST00000355766 OR4K1Q8NGD4 311 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 OR10G6Q8NH81 332 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 NAT14Q8WUY8 206 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 SELENOMQ8WWX9 145 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 NEIL2Q969S2 332 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 AHCYL2Q96HN2 611 aaKnown RBP6.57□□□□□ -1.36
VPS13A-201ENST00000355766 ANKRD27Q96NW4 1050 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 OR4K3Q96R72 315 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 AIF1LQ9BQI0 150 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 SSBP3Q9BWW4 388 aaPredicted RBP6.57□□□□□ -1.36
VPS13A-201ENST00000355766 ACPTQ9BZG2 426 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 RHBGQ9H310 441 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 UCK1Q9HA47 277 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 WDR41Q9HAD4 459 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 SLAMF7Q9NQ25 335 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 ACSS2Q9NR19 701 aa6.57□□□□□ -1.36
VPS13A-201ENST00000355766 INTS7Q9NVH2 962 aaKnown RBP6.57□□□□□ -1.36
VPS13A-201ENST00000355766 ABCD2Q9UBJ2 740 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms