RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 GGT2P36268 569 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 MAGEA8P43361 318 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 RUNDC3AQ59EK9 446 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 C1orf220Q5T0J3 134 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 PLXDC1Q8IUK5 500 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.62□□□□□ -0.39
SCN8A-202ENST00000355133 OR13C3Q8NGS6 347 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 ABHD5Q8WTS1 349 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 TSPEARQ8WU66 669 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 ASB12Q8WXK4 309 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 FN3KQ9H479 309 aa12.62□□□□□ -0.39
SCN8A-202ENST00000355133 DLGAP1O14490 977 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 SOX30O94993 753 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 HMGCLP35914 325 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 MAB21L1Q13394 359 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 RAB33AQ14088 237 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 LRRC37A5PQ49AS3 106 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 ARSKQ6UWY0 536 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF367Q7RTV3 350 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 FIBINQ8TAL6 211 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 FAM3CQ92520 227 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 PELOQ9BRX2 385 aaKnown RBP12.61□□□□□ -0.39
SCN8A-202ENST00000355133 NAA11Q9BSU3 229 aaPredicted RBP12.61□□□□□ -0.39
SCN8A-202ENST00000355133 A0A1B0GVC2 190 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 CD8B2A6NJW9 211 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 MEN1O00255 615 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 KCNJ13O60928 360 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 APBB3O95704 486 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 CD8BP10966 210 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 HTR1EP28566 365 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 CASP6P55212 293 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 ZXDBP98169 803 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 TMEM35AQ53FP2 167 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 CLLU1OSQ5K130 101 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 RAB11FIP2Q7L804 512 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 DNAAF1Q8NEP3 725 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 OR5L2Q8NGL0 311 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 CREB3L4Q8TEY5 395 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 AKAP1Q92667 903 aaKnown RBP eCLIP12.61□□□□□ -0.39
SCN8A-202ENST00000355133 THRSPQ92748 146 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 KCNK13Q9HB14 408 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 MTMR10Q9NXD2 777 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 CYBAP13498 195 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 RORAP35398 523 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 RBMXP38159 391 aaKnown RBP12.61□□□□□ -0.39
SCN8A-202ENST00000355133 TAS2R38P59533 333 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 DLX2Q07687 328 aaPredicted RBP12.61□□□□□ -0.39
SCN8A-202ENST00000355133 SCAPQ12770 1279 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 FAM76BQ5HYJ3 339 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 EIF5AL1Q6IS14 154 aaKnown RBP12.61□□□□□ -0.39
SCN8A-202ENST00000355133 ZC3H14Q6PJT7 736 aaKnown RBP12.61□□□□□ -0.39
SCN8A-202ENST00000355133 TMEM135Q86UB9 458 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 OR5J2Q8NH18 312 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 NECTIN4Q96NY8 510 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 RXFP3Q9NSD7 469 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 FAM189A1O60320 539 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 SLC19A2O60779 497 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 YES1P07947 543 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 CTSAP10619 480 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 HOXD8P13378 290 aaPredicted RBP12.61□□□□□ -0.39
SCN8A-202ENST00000355133 ETFAP13804 333 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 PYCR1P32322 319 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 DPP6P42658 865 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 LRRTM3Q86VH5 581 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 ALDH16A1Q8IZ83 802 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 HDAC2Q92769 488 aaKnown RBP12.61□□□□□ -0.39
SCN8A-202ENST00000355133 NEDD4LQ96PU5 975 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 C5AR2Q9P296 337 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 P04436 131 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 SFTPBP07988 381 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 GSTT2P0CG29 244 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 VEGFBP49765 207 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 HTRA3P83110 453 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 TMPRSS12Q86WS5 348 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 C16orf78Q8WTQ4 265 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 C7orf43Q8WVR3 580 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 KCNN1Q92952 543 aa12.61□□□□□ -0.39
SCN8A-202ENST00000355133 SLC25A44Q96H78 314 aaPredicted RBP12.61□□□□□ -0.39
SCN8A-202ENST00000355133 MON2Q7Z3U7 1717 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 SH3PXD2BA1X283 911 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 VSTM2BA6NLU5 285 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 A8MV72 311 aaPredicted RBP12.6□□□□□ -0.39
SCN8A-202ENST00000355133 EEF1E1O43324 174 aaKnown RBP12.6□□□□□ -0.39
SCN8A-202ENST00000355133 RPL13AP3Q6NVV1 102 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 PCDHGA6Q9Y5G7 932 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 ANXA3P12429 323 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 FOSL2P15408 326 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 RABIFP47224 123 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 CRISP1P54107 249 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 KANK2Q63ZY3 851 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 ENPP6Q6UWR7 440 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 KLBQ86Z14 1044 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 ZNF584Q8IVC4 421 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 RADILQ96JH8 1075 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 PITX2Q99697 317 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 STRA6Q9BX79 667 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 hCG_1807616A0A1W2PRN6 198 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 RASAL1O95294 804 aa12.6□□□□□ -0.39
SCN8A-202ENST00000355133 ENDOUP21128 410 aaKnown RBP12.6□□□□□ -0.39
SCN8A-202ENST00000355133 POU3F4P49335 361 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms