RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 GPAT4Q86UL3 456 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 ZFAND4Q86XD8 727 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 DENND6BQ8NEG7 585 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 FNDC8Q8TC99 324 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 THAP3Q8WTV1 239 aaPredicted RBP10.39□□□□□ -0.75
CLCN6-202ENST00000346436 THRSPQ92748 146 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 FAM118AQ9NWS6 357 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 EMC3Q9P0I2 261 aa10.39□□□□□ -0.75
CLCN6-202ENST00000346436 GNB5O14775 395 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 VILLO15195 856 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 BCKDHAP12694 445 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 ACPPP15309 386 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 HTR1EP28566 365 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 IL18R1Q13478 541 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 KIR2DS3Q14952 304 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLCN6-202ENST00000346436 SPEM1Q8N4L4 309 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 SLC15A4Q8N697 577 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 SCAMP4Q969E2 229 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF597Q96LX8 424 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 SLC35A5Q9BS91 424 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 DPH7Q9BTV6 452 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 HCFC1R1Q9NWW0 138 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 TVP23BQ9NYZ1 205 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 PLAGL1Q9UM63 463 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 MRPS2Q9Y399 296 aaKnown RBP10.38□□□□□ -0.75
CLCN6-202ENST00000346436 ADAM18Q9Y3Q7 739 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 H3BMQ9 156 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 SOX14O95416 240 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 MSL3P1P0C860 447 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 HSD17B1P14061 328 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 ADAM17P78536 824 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 TXNL4AP83876 142 aaKnown RBP10.38□□□□□ -0.75
CLCN6-202ENST00000346436 SCARB2Q14108 478 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 NFATC4Q14934 902 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 PCBP2Q15366 365 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLCN6-202ENST00000346436 C3orf38Q5JPI3 329 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 FAM26DQ5JW98 314 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 VTCN1Q7Z7D3 282 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 ADGRG5Q8IZF4 528 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 NFKBIDQ8NI38 313 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 GRHL3Q8TE85 626 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 CHTF18Q8WVB6 975 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 COG8Q96MW5 612 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 WDR77Q9BQA1 342 aaPredicted RBP10.38□□□□□ -0.75
CLCN6-202ENST00000346436 TPT1P8Q9HAU6 139 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 POPDC3Q9HBV1 291 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 SDR39U1Q9NRG7 319 aaPredicted RBP10.38□□□□□ -0.75
CLCN6-202ENST00000346436 HCSTQ9UBK5 93 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 PRRC2BQ5JSZ5 2229 aaKnown RBP10.38□□□□□ -0.75
CLCN6-202ENST00000346436 PLOD3O60568 738 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 RPLP0P05388 317 aaKnown RBP10.38□□□□□ -0.75
CLCN6-202ENST00000346436 RGRP47804 291 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 RAB15P59190 212 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 MZT2BQ6NZ67 158 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 HACD2Q6Y1H2 254 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 SNX29P2Q8IUI4 249 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 SORCS1Q8WY21 1168 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 DIRAS2Q96HU8 199 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 EPHX3Q9H6B9 360 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 PADI1Q9ULC6 663 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 C1orf226A1L170 272 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 H7BY64 318 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 PTNP21246 168 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 FAM180BQ6P0A1 224 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 RSPO2Q6UXX9 243 aaPredicted RBP10.38□□□□□ -0.75
CLCN6-202ENST00000346436 ZZZ3Q8IYH5 903 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 TMEM102Q8N9M5 508 aaPredicted RBP10.38□□□□□ -0.75
CLCN6-202ENST00000346436 PPP1R35Q8TAP8 253 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 TFAP2CQ92754 450 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 PRAP1Q96NZ9 151 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 PDCD10Q9BUL8 212 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 FUNDC2Q9BWH2 189 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 YTHDF1Q9BYJ9 559 aaKnown RBP10.38□□□□□ -0.75
CLCN6-202ENST00000346436 ZBP1Q9H171 429 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 OR51B5Q9H339 312 aa10.38□□□□□ -0.75
CLCN6-202ENST00000346436 CNOT11Q9UKZ1 510 aaKnown RBP10.38□□□□□ -0.75
CLCN6-202ENST00000346436 M0QX08 132 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 PDCD5O14737 125 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 SLC22A1O15245 554 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 GSTM3P21266 225 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 CSNK1EP49674 416 aaKnown RBP10.37□□□□□ -0.75
CLCN6-202ENST00000346436 SRYQ05066 204 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 SELPLGQ14242 412 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 SUSD1Q6UWL2 747 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 HMGN2P46Q86SG4 172 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 TICAM1Q8IUC6 712 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 GPALPP1Q8IXQ4 340 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 OR6K6Q8NGW6 343 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 TMEM30AQ9NV96 361 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 PMF1-BGLAPU3KQ54 211 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 ATE1O95260 518 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 EBLN1P0CF75 366 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 GSTM2P28161 218 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 PCSK6P29122 969 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 EIF2DP41214 584 aaKnown RBP10.37□□□□□ -0.75
CLCN6-202ENST00000346436 MECP2P51608 486 aaKnown RBP10.37□□□□□ -0.75
CLCN6-202ENST00000346436 OLR1P78380 273 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 ABHD18Q0P651 414 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 CHAF1BQ13112 559 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms