RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 THEGLP0DJG4 465 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 COL9A1P20849 921 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 HLCSP50747 726 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 SELENOWP63302 87 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 PRR5P85299 388 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 CHRNEQ04844 493 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 FGL2Q14314 439 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 PRSS36Q5K4E3 855 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 PRAMEF17Q5VTA0 474 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 PACRGLQ8N7B6 248 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 OR13H1Q8NG92 308 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 TEX47Q8TBZ9 253 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 COQ10AQ96MF6 247 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 DCSTAMPQ9H295 470 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 RETREG1Q9H6L5 497 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 USP36Q9P275 1121 aaKnown RBP12.6□□□□□ -0.39
CASC4-202ENST00000345795 P2RX2Q9UBL9 471 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 CAB39Q9Y376 341 aaPredicted RBP12.6□□□□□ -0.39
CASC4-202ENST00000345795 WDR45Q9Y484 360 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 DNAJC13O75165 2243 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 H0YIV9 168 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 GFRA2O00451 464 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 FUT1P19526 365 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 RAE1P78406 368 aaKnown RBP12.6□□□□□ -0.39
CASC4-202ENST00000345795 NFATC3Q12968 1075 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 DGUOKQ16854 277 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 AGBL4Q5VU57 503 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 SPATC1Q76KD6 591 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 DEPDC7Q96QD5 511 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 TMED9Q9BVK6 235 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 C1QTNF3Q9BXJ4 246 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 OR8D2Q9GZM6 311 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 SPIN1Q9Y657 262 aaPredicted RBP12.6□□□□□ -0.39
CASC4-202ENST00000345795 KCNE3Q9Y6H6 103 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 ANKRD36A6QL64 1941 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 LOC105369274A0A096LPK9 316 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 LOC102723532A0A0G2JNH3 316 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 FAM170BA6NMN3 283 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 A8MV72 311 aaPredicted RBP12.6□□□□□ -0.39
CASC4-202ENST00000345795 LRRTM2O43300 516 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 FCMRO60667 390 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 SCN2BO60939 215 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 BCAS1O75363 584 aaPredicted RBP12.6□□□□□ -0.39
CASC4-202ENST00000345795 NPPAP01160 153 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 ALOX5P09917 674 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 CPMP14384 443 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 JUNDP17535 347 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 IGFALSP35858 605 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 GINS1Q14691 196 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 RPE65Q16518 533 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 NKAIN2Q5VXU1 208 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 OR4N4Q8N0Y3 316 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 MMABQ96EY8 250 aaPredicted RBP12.6□□□□□ -0.39
CASC4-202ENST00000345795 EGLN3Q9H6Z9 239 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 GORASP2Q9H8Y8 452 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 NDUFAF4Q9P032 175 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 ZFR2Q9UPR6 939 aaKnown RBP12.6□□□□□ -0.39
CASC4-202ENST00000345795 CSNK1G3Q9Y6M4 447 aa12.6□□□□□ -0.39
CASC4-202ENST00000345795 TLR4O00206 839 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 NR2F6P10588 404 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 AKT2P31751 481 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 GABRA3P34903 492 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 RPL3P39023 403 aaKnown RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 CLK3P49761 638 aaKnown RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 EIF2B2P49770 351 aaKnown RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 ADPRHP54922 357 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 CSNK1G2P78368 415 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 PRDX1Q06830 199 aaKnown RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 TOP3AQ13472 1001 aaPredicted RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 C1DQ13901 141 aaKnown RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 SYCE2Q6PIF2 218 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 PTRH1Q86Y79 214 aaKnown RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 ERI1Q8IV48 349 aaKnown RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 IL17RCQ8NAC3 791 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 OR9A4Q8NGU2 314 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 TEFMQ96QE5 360 aaKnown RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 ZNF300Q96RE9 604 aaPredicted RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 GDE1Q9NZC3 331 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 RPS6KB2Q9UBS0 482 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 AIFM1O95831 613 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 GADD45AP24522 165 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 SERPINB1P30740 379 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 TGM4P49221 684 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 MAN2A2P49641 1150 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 CAV3P56539 151 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 WNT3P56703 355 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 TAS2R38P59533 333 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 STXBP1P61764 594 aaKnown RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 CSNK2BP67870 215 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 GPR18Q14330 331 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 PTGES3Q15185 160 aaKnown RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 SLC16A11Q8NCK7 471 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 OR4K5Q8NGD3 323 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 OR52N2Q8NGI0 321 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 TESCQ96BS2 214 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 WDR92Q96MX6 357 aa12.59□□□□□ -0.39
CASC4-202ENST00000345795 TRIM45Q9H8W5 580 aaPredicted RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 WSB2Q9NYS7 404 aaPredicted RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 THAP10Q9P2Z0 257 aaPredicted RBP12.59□□□□□ -0.39
CASC4-202ENST00000345795 BTNL2Q9UIR0 455 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms