RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ADRB3P13945 408 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 PRPS1L1P21108 318 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 EPHB3P54753 998 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 SGPP2Q8IWX5 399 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 AVL9Q8NBF6 648 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 OR56A1Q8NGH5 318 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 DENND1AQ8TEH3 1009 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 SLC45A3Q96JT2 553 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 QTRT2Q9H974 415 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 MKKSQ9NPJ1 570 aaPredicted RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 METTL15A6NJ78 407 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 TSPAN3O60637 253 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ADH1CP00326 375 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 GNRH1P01148 92 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 AMY2AP04746 511 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 STAG3L1P0CL83 205 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 HLA-DOBP13765 273 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 MARCKSL1P49006 195 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PPT1P50897 306 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 GLO1Q04760 184 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 DPY19L2P1Q6NXN4 242 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CMASQ8NFW8 434 aaPredicted RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 TTLQ8NG68 377 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CNIH3Q8TBE1 160 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 COA1Q9GZY4 146 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 MMP28Q9H239 520 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ACOT13Q9NPJ3 140 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 DNAJC5BQ9UF47 199 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PCDHGA9Q9Y5G4 932 aaKnown RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 CRYBG1Q9Y4K1 1723 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 BTBD17A6NE02 478 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 LALBAP00709 142 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PDGFAP04085 211 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 OXTRP30559 389 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PSPHP78330 225 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CLCQ05315 142 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PDZK1IP1Q13113 114 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 TKFCQ3LXA3 575 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SLC35F1Q5T1Q4 408 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 HEPHL1Q6MZM0 1159 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SCIMPQ6UWF3 145 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SLC29A4Q7RTT9 530 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 TIPARPQ7Z3E1 657 aaKnown RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 RETREG3Q86VR2 466 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 TSPYL5Q86VY4 417 aaPredicted RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 TMEM130Q8N3G9 435 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 BOLLQ8N9W6 283 aaKnown RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 C2CD4CQ8TF44 421 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 BPIFA2Q96DR5 249 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ADAD1Q96M93 576 aaKnown RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 PKP4Q99569 1192 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 EPYCQ99645 322 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PRRC2AP48634 2157 aaKnown RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 ZNF850A8MQ14 1090 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 K7ERU9 68 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CYB5BO43169 146 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CST2P09228 141 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PGCP20142 388 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ZP3P21754 424 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 BDNFP23560 247 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 OR1G1P47890 313 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 NOL9Q5SY16 702 aaKnown RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 AWAT2Q6E213 333 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 APOBEC3FQ8IUX4 373 aaKnown RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 OR9I1Q8NGQ6 314 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SFXN5Q8TD22 340 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 OVCA2Q8WZ82 227 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PNPLA2Q96AD5 504 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 UHRF1Q96T88 793 aaPredicted RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 TKTL2Q9H0I9 626 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CNTN6Q9UQ52 1028 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ASTN1O14525 1302 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 TARBP1Q13395 1621 aaKnown RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 LRRC10BA6NIK2 292 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 KIAA0355O15063 1070 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 KCNJ13O60928 360 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SLC35G4P0C7Q5 338 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CKMT2P17540 419 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SPI1P17947 270 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CELP19835 753 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CX3CR1P49238 355 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 KCNC4Q03721 635 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 UGCGQ16739 394 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 FFAR4Q5NUL3 377 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ARHGAP40Q5TG30 622 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 C3orf67Q6ZVT6 689 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 GTF3C2Q8WUA4 911 aaPredicted RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 BLNKQ8WV28 456 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 GIMAP1Q8WWP7 306 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ST8SIA4Q92187 359 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CMTM3Q96MX0 182 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SYT3Q9BQG1 590 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ANKRD60Q9BZ19 345 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 WWTR1Q9GZV5 400 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ITM2CQ9NQX7 267 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 EVA1BQ9NVM1 165 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 TMEM98Q9Y2Y6 226 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 A0A0B4J2A0 478 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 A0A1B0GVG6 124 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 M0R3H8 397 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms