RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 C3orf18Q9UK00 162 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 PCDHGB3Q9Y5G1 929 aa18.82■□□□□ 0.6
RTN1-202ENST00000342503 VGLL3A8MV65 326 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 BCAT2O15382 392 aaPredicted RBP18.81■□□□□ 0.6
RTN1-202ENST00000342503 PIAS2O75928 621 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 PDE9AO76083 593 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 MFN2O95140 757 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 RECKO95980 971 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 TFAP2AP05549 437 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 PIGAP37287 484 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 RAD23AP54725 363 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 RFX4Q33E94 735 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 WDR45BQ5MNZ6 344 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 MCATQ8IVS2 390 aaKnown RBP18.81■□□□□ 0.6
RTN1-202ENST00000342503 CA13Q8N1Q1 262 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 SDR16C5Q8N3Y7 309 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 METTL25Q8N6Q8 603 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 ANKRA2Q9H9E1 313 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 PRDM9Q9NQV7 894 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 SH3GLB1Q9Y371 365 aa18.81■□□□□ 0.6
RTN1-202ENST00000342503 NR2F1P10589 423 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 ITGA2P17301 1181 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 ANXA11P50995 505 aaKnown RBP18.8■□□□□ 0.6
RTN1-202ENST00000342503 KCTD21Q4G0X4 260 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 C14orf28Q4W4Y0 310 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 LIN52Q52LA3 116 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 ZC3H12BQ5HYM0 836 aaKnown RBP18.8■□□□□ 0.6
RTN1-202ENST00000342503 KDM4DQ6B0I6 523 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 TSSK4Q6SA08 328 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 GALNT5Q7Z7M9 940 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 DNAJC22Q8N4W6 341 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 GPR32P1Q8NGA4 272 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 MIPOL1Q8TD10 442 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 RSPO3Q9BXY4 272 aaPredicted RBP18.8■□□□□ 0.6
RTN1-202ENST00000342503 ZNF451Q9Y4E5 1061 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 LYVE1Q9Y5Y7 322 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 SPACA6W5XKT8 324 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 J3KTA2 159 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 TNFRSF11BO00300 401 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 ADAMDEC1O15204 470 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 KIF1CO43896 1103 aaKnown RBP18.8■□□□□ 0.6
RTN1-202ENST00000342503 XCR1P46094 333 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 RPL5P46777 297 aaKnown RBP18.8■□□□□ 0.6
RTN1-202ENST00000342503 PPM1FP49593 454 aaPredicted RBP18.8■□□□□ 0.6
RTN1-202ENST00000342503 AFF3P51826 1226 aaKnown RBP18.8■□□□□ 0.6
RTN1-202ENST00000342503 SPIBQ01892 262 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 USP53Q70EK8 1073 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 OLIG3Q7RTU3 272 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 SAMD14Q8IZD0 417 aaPredicted RBP18.8■□□□□ 0.6
RTN1-202ENST00000342503 TMEM52Q8NDY8 209 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 COL26A1Q96A83 441 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 ZNF607Q96SK3 696 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 TREX2Q9BQ50 279 aaPredicted RBP18.8■□□□□ 0.6
RTN1-202ENST00000342503 FAM192AQ9GZU8 254 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 EXD2Q9NVH0 621 aa18.8■□□□□ 0.6
RTN1-202ENST00000342503 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 LOC100130705A0A1B0GUX0 176 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 SGK494L7N484 410 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 DNAJB5O75953 348 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 FESP07332 822 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 PPP2R1BP30154 601 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 SHC2P98077 582 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 IL1RL1Q01638 556 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 ID2Q02363 134 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 FUT5Q11128 374 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 PUM1Q14671 1186 aaKnown RBP eCLIP18.79■□□□□ 0.6
RTN1-202ENST00000342503 SATL1Q86VE3 508 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 ARHGEF39Q8N4T4 335 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 OR7G2Q8NG99 324 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 OR4C15Q8NGM1 316 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 APOBEC4Q8WW27 367 aaKnown RBP18.79■□□□□ 0.6
RTN1-202ENST00000342503 GIMAP5Q96F15 307 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 TCTN2Q96GX1 697 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 COL21A1Q96P44 957 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 OR7D2Q96RA2 312 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 IER2Q9BTL4 223 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 GRIP2Q9C0E4 1043 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 EQTNQ9NQ60 294 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 KIF17Q9P2E2 1029 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 GPC6Q9Y625 555 aaPredicted RBP18.79■□□□□ 0.6
RTN1-202ENST00000342503 KCNE3Q9Y6H6 103 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 ENPP4Q9Y6X5 453 aa18.79■□□□□ 0.6
RTN1-202ENST00000342503 A0A1B0GVT2 93 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 CYR61O00622 381 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 CHRM4P08173 479 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 ITGAMP11215 1152 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 CPMP14384 443 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 POLR2IP36954 125 aaKnown RBP18.78■□□□□ 0.6
RTN1-202ENST00000342503 CDH12P55289 794 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 CDH15P55291 814 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 GFERP55789 205 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 C6orf132Q5T0Z8 1188 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 FAHD1Q6P587 224 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 THAP5Q7Z6K1 395 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 C8orf59Q8N0T1 100 aaPredicted RBP18.78■□□□□ 0.6
RTN1-202ENST00000342503 LGI4Q8N135 537 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 ATG16L2Q8NAA4 619 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 PIK3C3Q8NEB9 887 aa18.78■□□□□ 0.6
RTN1-202ENST00000342503 MAFAQ8NHW3 353 aaPredicted RBP18.78■□□□□ 0.6
RTN1-202ENST00000342503 BBS10Q8TAM1 723 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms