RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 NLGN3Q9NZ94 848 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 SRPK3Q9UPE1 567 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 FAM186AA6NE01 2351 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 C4orf47A7E2U8 309 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 K7ESF4 209 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 NME4O00746 187 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 NUDT21O43809 227 aaKnown RBP11.09□□□□□ -0.63
C2orf88-201ENST00000340623 SP9P0CG40 484 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 NR1H2P55055 460 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 UGT8Q16880 541 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 OR5M3Q8NGP4 307 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 MAL2Q969L2 176 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 MTERF3Q96E29 417 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 REXO5Q96IC2 774 aaKnown RBP11.09□□□□□ -0.63
C2orf88-201ENST00000340623 PLEKHA8Q96JA3 519 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 SPRTNQ9H040 489 aaPredicted RBP11.09□□□□□ -0.63
C2orf88-201ENST00000340623 CLK4Q9HAZ1 481 aaKnown RBP11.09□□□□□ -0.63
C2orf88-201ENST00000340623 PCDHGA7Q9Y5G6 932 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 CACNA1CQ13936 2221 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 A0A1B0GTQ1 180 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 H3BNH8 94 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 NPPAP01160 153 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 IL12AP29459 219 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 RNF144AP50876 292 aaPredicted RBP11.09□□□□□ -0.63
C2orf88-201ENST00000340623 CCL7P80098 99 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 PEX5LQ8IYB4 626 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 RIT1Q92963 219 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 CENPNQ96H22 339 aaPredicted RBP11.09□□□□□ -0.63
C2orf88-201ENST00000340623 SMURF2Q9HAU4 748 aa11.09□□□□□ -0.63
C2orf88-201ENST00000340623 MRTO4Q9UKD2 239 aaKnown RBP11.09□□□□□ -0.63
C2orf88-201ENST00000340623 FAM220BPB1ANY3 271 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 FAM47E-STBD1D6RA91 191 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 FAM227AF5H4B4 570 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 FBP2O00757 339 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 EMC8O43402 210 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 TMPRSS11DO60235 418 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 FOXD2O60548 495 aaPredicted RBP11.08□□□□□ -0.64
C2orf88-201ENST00000340623 TPST2O60704 377 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 CTSVO60911 334 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 IL12BP29460 328 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 BNC1Q01954 994 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 ZNF750Q32MQ0 723 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 SLC29A4Q7RTT9 530 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 ADCK1Q86TW2 530 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 PAQR7Q86WK9 346 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 ARMC8Q8IUR7 673 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 DNASE2BQ8WZ79 361 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 TBC1D20Q96BZ9 403 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 DHRS1Q96LJ7 313 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 CRB3Q9BUF7 120 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 FNDC11Q9BVV2 318 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 MUC13Q9H3R2 512 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 Q9N2J8 555 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 CALML5Q9NZT1 146 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 IGHV1OR21-1A0A087WYE8 117 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 H3BN98 237 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 PRAMEF4O60810 478 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 CREG1O75629 220 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 IFNW1P05000 195 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 FHP07954 510 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 PSMD7P51665 324 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 HBA1P69905 142 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 PRAMEF9Q5VWM5 478 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 WDR53Q7Z5U6 358 aaPredicted RBP11.08□□□□□ -0.64
C2orf88-201ENST00000340623 C8orf59Q8N0T1 100 aaPredicted RBP11.08□□□□□ -0.64
C2orf88-201ENST00000340623 GTF2H4Q92759 462 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 TM4SF18Q96CE8 201 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 DGCR14Q96DF8 476 aaKnown RBP11.08□□□□□ -0.64
C2orf88-201ENST00000340623 PNPLA3Q9NST1 481 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 MAGED1Q9Y5V3 778 aaPredicted RBP11.08□□□□□ -0.64
C2orf88-201ENST00000340623 CSNK1G3Q9Y6M4 447 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 ZNF749O43361 778 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 GABRA3P34903 492 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 ATP1A4Q13733 1029 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 C6orf183Q5T699 404 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 PATL1Q86TB9 770 aaKnown RBP11.08□□□□□ -0.64
C2orf88-201ENST00000340623 CADM2Q8N3J6 435 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 OR8J3Q8NGG0 315 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 OR51Q1Q8NH59 317 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 CMTM6Q9NX76 183 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 NDUFA13Q9P0J0 144 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 WDR45Q9Y484 360 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 TESMINQ9Y4I5 508 aa11.08□□□□□ -0.64
C2orf88-201ENST00000340623 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.07□□□□□ -0.64
C2orf88-201ENST00000340623 A0A1W2PR77 199 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 IGLV3-19P01714 112 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 GPIP06744 558 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 UMPSP11172 480 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 ITGA2P17301 1181 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 CLK3P49761 638 aaKnown RBP11.07□□□□□ -0.64
C2orf88-201ENST00000340623 TAS2R41P59536 307 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 MAPK11Q15759 364 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 PRAMEF17Q5VTA0 474 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 B3GNT6Q6ZMB0 384 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 ZDHHC21Q8IVQ6 265 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 ULBP3Q9BZM4 244 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 OR51I1Q9H343 314 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 NT5DC2Q9H857 520 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 SMPD3Q9NY59 655 aaPredicted RBP11.07□□□□□ -0.64
C2orf88-201ENST00000340623 UBAP1Q9NZ09 502 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms