RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 NEURL2Q9BR09 285 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 CHCHD6Q9BRQ6 235 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 SERHL2Q9H4I8 314 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 LMAN1LQ9HAT1 526 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 A4GALTQ9NPC4 353 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 ZFR2Q9UPR6 939 aaKnown RBP15.43■□□□□ 0.06
LITAF-201ENST00000339430 ZAR1LA6NP61 321 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 A8MVJ9 347 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 SCAMP1O15126 338 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 SLC28A2O43868 658 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 RPN2P04844 631 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 OR12D1P0DN82 309 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 ALPPL2P10696 532 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 ARHGAP19Q14CB8 494 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 UBXN2BQ14CS0 331 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 SYPL1Q16563 259 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 TCTN3Q6NUS6 607 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 LACC1Q8IV20 430 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 SLC30A8Q8IWU4 369 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 CACTIN-AS1Q8N1I8 211 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 CLIP4Q8N3C7 705 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 HMGB4Q8WW32 186 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 FAM131CQ96AQ9 280 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 RGMAQ96B86 450 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 C12orf66Q96MD2 445 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 CENPOQ9BU64 300 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 IMP3Q9NV31 184 aaKnown RBP15.43■□□□□ 0.06
LITAF-201ENST00000339430 SCML1Q9UN30 329 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 VCANP13611 3396 aa15.43■□□□□ 0.06
LITAF-201ENST00000339430 TBC1D3DA0A087WVF3 549 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 TBC1D3IA0A087WXS9 549 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 TBC1D3EA0A087X179 549 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 TBC1D3KA0A087X1G2 549 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 TBC1D3FA6NER0 549 aaPredicted RBP15.42■□□□□ 0.06
LITAF-201ENST00000339430 TBC1D3LB9A6J9 549 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 OR10H3O60404 316 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 PAK4O96013 591 aaPredicted RBP15.42■□□□□ 0.06
LITAF-201ENST00000339430 RPLP0P05388 317 aaKnown RBP15.42■□□□□ 0.06
LITAF-201ENST00000339430 TBC1D3HP0C7X1 549 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 GABRG2P18507 467 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 CD97P48960 835 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 CCT3P49368 545 aaKnown RBP15.42■□□□□ 0.06
LITAF-201ENST00000339430 CD300CQ08708 224 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 ZNF404Q494X3 552 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 TBC1D3GQ6DHY5 549 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 TBC1D3CQ6IPX1 549 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 LINC00299Q6ZSB3 139 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 TBC1D3Q8IZP1 549 aaPredicted RBP15.42■□□□□ 0.06
LITAF-201ENST00000339430 TEFMQ96QE5 360 aaKnown RBP15.42■□□□□ 0.06
LITAF-201ENST00000339430 MAPKAP1Q9BPZ7 522 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 NEUROD4Q9HD90 331 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 TRPC4Q9UBN4 977 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 KCND3Q9UK17 655 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 TMCC3Q9ULS5 477 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 KCNK6Q9Y257 313 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 NCKAP1Q9Y2A7 1128 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 PLEKHM1Q9Y4G2 1056 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 A0A1W2PQU0 124 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 TPST2O60704 377 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 ELAVL4P26378 380 aaKnown RBP15.42■□□□□ 0.06
LITAF-201ENST00000339430 GPC1P35052 558 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 RPS21P63220 83 aaKnown RBP15.42■□□□□ 0.06
LITAF-201ENST00000339430 CSNK1G2P78368 415 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 DOC2BQ14184 412 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 FGL2Q14314 439 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 TMEM31Q5JXX7 168 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 SIX5Q8N196 739 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 XAGE5Q8WWM1 108 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 ZBED6CLQ96FA7 236 aaPredicted RBP15.42■□□□□ 0.06
LITAF-201ENST00000339430 INSM2Q96T92 566 aaPredicted RBP15.42■□□□□ 0.06
LITAF-201ENST00000339430 DPH7Q9BTV6 452 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 FOXQ1Q9C009 403 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 SEMA3GQ9NS98 782 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 C2orf42Q9NWW7 574 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 WNT16Q9UBV4 365 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 SEC14L3Q9UDX4 400 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 IFT52Q9Y366 437 aa15.42■□□□□ 0.06
LITAF-201ENST00000339430 IGKV1-8A0A0C4DH67 115 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 PRAMEF27A3QJZ7 478 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 METTL15A6NJ78 407 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 H3BN98 237 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 DSCR3O14972 297 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 ZW10O43264 779 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 RNGTTO60942 597 aaKnown RBP15.41■□□□□ 0.06
LITAF-201ENST00000339430 HOXB3P14651 431 aaPredicted RBP15.41■□□□□ 0.06
LITAF-201ENST00000339430 PORP16435 677 aaPredicted RBP15.41■□□□□ 0.06
LITAF-201ENST00000339430 MAT2AP31153 395 aaKnown RBP15.41■□□□□ 0.06
LITAF-201ENST00000339430 SSR2P43308 183 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 RGS6P49758 472 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 TPMTP51580 245 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 PRKAG1P54619 331 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 USP30Q70CQ3 517 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 USP43Q70EL4 1123 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 Q96MT0 163 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 PSD2Q9BQI7 771 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 YIPF4Q9BSR8 244 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 AICDAQ9GZX7 198 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 OR51I1Q9H343 314 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 KLHL31Q9H511 634 aa15.41■□□□□ 0.06
LITAF-201ENST00000339430 ABCB10Q9NRK6 738 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms