RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 NDEL1Q9GZM8 345 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 PCBD2Q9H0N5 130 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 C11orf16Q9NQ32 467 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 ANGPT4Q9Y264 503 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 AP3M1Q9Y2T2 418 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 FAM32AQ9Y421 112 aaKnown RBP11.88□□□□□ -0.51
LIMK1-201ENST00000336180 SEC16AO15027 2179 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 CELSR3Q9NYQ7 3312 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 FAM20BO75063 409 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 TRMUO75648 421 aaKnown RBP11.88□□□□□ -0.51
LIMK1-201ENST00000336180 F3P13726 295 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 FOSL1P15407 271 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 ZNF182P17025 639 aaPredicted RBP11.88□□□□□ -0.51
LIMK1-201ENST00000336180 AKT2P31751 481 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 PCBP4P57723 403 aaKnown RBP11.88□□□□□ -0.51
LIMK1-201ENST00000336180 ILF3Q12906 894 aaKnown RBP eCLIP11.88□□□□□ -0.51
LIMK1-201ENST00000336180 ERV3-1Q14264 604 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 KDM4DQ6B0I6 523 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 AQP11Q8NBQ7 271 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 ZNF540Q8NDQ6 660 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 GIPC3Q8TF64 312 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 OR5P2Q8WZ92 322 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 SLC9A6Q92581 669 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 ZBED6CLQ96FA7 236 aaPredicted RBP11.88□□□□□ -0.51
LIMK1-201ENST00000336180 TREX2Q9BQ50 279 aaPredicted RBP11.88□□□□□ -0.51
LIMK1-201ENST00000336180 EPS8L2Q9H6S3 715 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 KIR3DX1Q9H7L2 352 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 MVB12BQ9H7P6 319 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 LMAN1LQ9HAT1 526 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 SEC14L3Q9UDX4 400 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 ASB4Q9Y574 426 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 SPAG17Q6Q759 2223 aa11.88□□□□□ -0.51
LIMK1-201ENST00000336180 TOR1BO14657 336 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 KDM1AO60341 852 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 CLEC3AO75596 197 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 BMP10O95393 424 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 HLCSP50747 726 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 NPRL3Q12980 569 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 LSAMPQ13449 338 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 SEC23BQ15437 767 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 ZIC1Q15915 447 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 XAF1Q6GPH4 301 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 REEP3Q6NUK4 255 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 ZNF554Q86TJ5 538 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 PJA1Q8NG27 643 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 GOT1L1Q8NHS2 421 aaPredicted RBP11.87□□□□□ -0.51
LIMK1-201ENST00000336180 SUN3Q8TAQ9 357 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 PHF10Q8WUB8 498 aaKnown RBP11.87□□□□□ -0.51
LIMK1-201ENST00000336180 LZICQ8WZA0 190 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 OR2A14Q96R47 310 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 IL4I1Q96RQ9 567 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 DDX31Q9H8H2 851 aaKnown RBP11.87□□□□□ -0.51
LIMK1-201ENST00000336180 ACTR10Q9NZ32 417 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 MMP17Q9ULZ9 603 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 KRBA1A5PL33 1030 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 GADD45GO95257 159 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 GASTP01350 101 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 PPIBP23284 216 aaKnown RBP11.87□□□□□ -0.51
LIMK1-201ENST00000336180 C21orf33P30042 268 aaPredicted RBP11.87□□□□□ -0.51
LIMK1-201ENST00000336180 HSD17B2P37059 387 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 VSX2P58304 361 aaPredicted RBP11.87□□□□□ -0.51
LIMK1-201ENST00000336180 TMEM52Q8NDY8 209 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 ANKMY1Q9P2S6 941 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 MKLN1Q9UL63 735 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.87□□□□□ -0.51
LIMK1-201ENST00000336180 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.87□□□□□ -0.51
LIMK1-201ENST00000336180 COMMD3-BMI1R4GMX3 469 aa11.87□□□□□ -0.51
LIMK1-201ENST00000336180 MAN2B1O00754 1011 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 CHRM4P08173 479 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 PSMB9P28065 219 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 KRT20P35900 424 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 BNIP3Q12983 259 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 RUNX2Q13950 521 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 TEAD4Q15561 434 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 EOGTQ5NDL2 527 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 BROXQ5VW32 411 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 SAXO2Q658L1 398 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 FIGLAQ6QHK4 219 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 FAM111BQ6SJ93 734 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 IQCF1Q8N6M8 205 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 C7orf57Q8NEG2 295 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 OR2L5Q8NG80 312 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 DNASE1L2Q92874 299 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 FAM60AQ9NP50 221 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 USE1Q9NZ43 259 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 CPNE7Q9UBL6 633 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 CORO2BQ9UQ03 480 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 ENTPD4Q9Y227 616 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 H3BMQ9 156 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 FCMRO60667 390 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 SEMA3DO95025 777 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 APOL3O95236 402 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 MT-ND2P03891 347 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 MSL3P1P0C860 447 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 NTSP30990 170 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 MLLT1Q03111 559 aaPredicted RBP11.86□□□□□ -0.51
LIMK1-201ENST00000336180 EIF2B5Q13144 721 aaKnown RBP11.86□□□□□ -0.51
LIMK1-201ENST00000336180 NPTX1Q15818 432 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 FCRL6Q6DN72 434 aa11.86□□□□□ -0.51
LIMK1-201ENST00000336180 ZNF773Q6PK81 442 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms