RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 USP30Q70CQ3 517 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 RAB43Q86YS6 212 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 KIAA1958Q8N8K9 716 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 TTLQ8NG68 377 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 TMEM19Q96HH6 336 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 CHST8Q9H2A9 424 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 CXorf36Q9H7Y0 433 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 SSR3Q9UNL2 185 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 MEIOCA2RUB1 952 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 NPIPB8E9PQR5 432 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 MPZL2O60487 215 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 GPX5O75715 221 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 NR2F1P10589 423 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 XCR1P46094 333 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 PRKCDQ05655 676 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 PIN1Q13526 163 aaPredicted RBP15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 NUMA1Q14980 2115 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 LRRC26Q2I0M4 334 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 ARSKQ6UWY0 536 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 FAM131AQ6UXB0 335 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 LIPIQ6XZB0 460 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 ING5Q8WYH8 240 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 C1GALT1C1Q96EU7 318 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 SIGLEC11Q96RL6 698 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 NRTNQ99748 197 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 ABCG4Q9H172 646 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 POLMQ9NP87 494 aaPredicted RBP15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 ACOXLQ9NUZ1 547 aa15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 MRPL39Q9NYK5 338 aaKnown RBP15.69■□□□□ 0.1
CDC42EP4-201ENST00000335793 RANBP2P49792 3224 aaKnown RBP15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 SLC5A10A0PJK1 596 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 K7ESM1 405 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 BTN3A3O00478 584 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 DGKGP49619 791 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 TAP2Q03519 686 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 MPEG1Q2M385 716 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 NXPE4Q6UWF7 544 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 GPR151Q8TDV0 419 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 ABCB9Q9NP78 766 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 SPHK2Q9NRA0 654 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 TDP1Q9NUW8 608 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 TAC3Q9UHF0 121 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 KLK4Q9Y5K2 254 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 NME6O75414 186 aaPredicted RBP15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 CDRT1O95170 752 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 ALPPL2P10696 532 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 TIE1P35590 1138 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 RPS19P39019 145 aaKnown RBP15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 CCR2P41597 374 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 PRLHRP49683 370 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 ZNF805Q5CZA5 627 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 PRAMEF14Q5SWL7 426 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 PRAMEF13Q5VWM6 474 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 KRT78Q8N1N4 520 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 HORMAD2Q8N7B1 307 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 OR4C15Q8NGM1 316 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 TOE1Q96GM8 510 aaKnown RBP15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 ZDHHC4Q9NPG8 344 aa15.68■□□□□ 0.1
CDC42EP4-201ENST00000335793 FEZF1A0PJY2 475 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 MMP20O60882 483 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 H1F0P07305 194 aaKnown RBP15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 CD72P21854 359 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 CCT3P49368 545 aaKnown RBP15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 AP2S1P53680 142 aaPredicted RBP15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 CCDC85BQ15834 202 aaPredicted RBP15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 PDZK1Q5T2W1 519 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 TMEM215Q68D42 235 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 PAQR6Q6TCH4 344 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 CFAP77Q6ZQR2 320 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 NLRP8Q86W28 1048 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 SLC38A5Q8WUX1 472 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 ZCCHC2Q9C0B9 1178 aaKnown RBP15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 SAV1Q9H4B6 383 aaPredicted RBP15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 SMURF1Q9HCE7 757 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 CCDC59Q9P031 241 aaKnown RBP15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 SLC9A3R1O14745 358 aaPredicted RBP15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 ERAL1O75616 437 aaKnown RBP15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 SLITRK5O94991 958 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 TSPAN19P0C672 248 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 ARAFP10398 606 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 LAG3P18627 525 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 BUD31P41223 144 aaPredicted RBP15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 RORCP51449 518 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 CCDC149Q6ZUS6 474 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 ADIPOR2Q86V24 386 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 CRIPAKQ8N1N5 446 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 OR4M1Q8NGD0 313 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 ASB12Q8WXK4 309 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 TSSK6Q9BXA6 273 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 CYB5R1Q9UHQ9 305 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 SERTM1A2A2V5 107 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 GLOD5A6NK44 160 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 PI15O43692 258 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 UGT2B17O75795 530 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 CTSLP07711 333 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 CBX5P45973 191 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 METAP1P53582 386 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 PNLIPRP1P54315 467 aa15.67■□□□□ 0.1
CDC42EP4-201ENST00000335793 LIM2P55344 173 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms