RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 PTPRRQ15256 657 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 GPR19Q15760 415 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 NKPD1Q17RQ9 610 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 ZC3H14Q6PJT7 736 aaKnown RBP9.4□□□□□ -0.91
COL4A6-201ENST00000334504 CILP2Q8IUL8 1156 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 OR5H2Q8NGV7 314 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 FRS2Q8WU20 508 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 LURAP1Q96LR2 239 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 NSUN5Q96P11 429 aaKnown RBP9.4□□□□□ -0.91
COL4A6-201ENST00000334504 SLC38A3Q99624 504 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 DPH2Q9BQC3 489 aaPredicted RBP9.4□□□□□ -0.91
COL4A6-201ENST00000334504 ST6GALNAC4Q9H4F1 302 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 DMAC2Q9NW81 257 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 SCML2Q9UQR0 700 aa9.4□□□□□ -0.91
COL4A6-201ENST00000334504 LOC105369274A0A096LPK9 316 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 LOC102723532A0A0G2JNH3 316 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ICMTO60725 284 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 SOX30O94993 753 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 POU4F2Q12837 409 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 DPY19L2P1Q6NXN4 242 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 TRIM46Q7Z4K8 759 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 DCP2Q8IU60 420 aaKnown RBP9.39□□□□□ -0.91
COL4A6-201ENST00000334504 OR4N4Q8N0Y3 316 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 SVBPQ8N300 66 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 PNPLA2Q96AD5 504 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 GPR20Q99678 358 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 GON7Q9BXV9 100 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 RANGRFQ9HD47 186 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-201ENST00000334504 COPS3Q9UNS2 423 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ASB4Q9Y574 426 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 PCDHB11Q9Y5F2 797 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 BAZ2BQ9UIF8 2168 aaKnown RBP9.39□□□□□ -0.91
COL4A6-201ENST00000334504 SMIM35A0A1B0GVV1 85 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 SLURP2P0DP57 97 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ETV1P50549 477 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 RAB8AP61006 207 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 CAP1Q01518 475 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 DECR1Q16698 335 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.39□□□□□ -0.91
COL4A6-201ENST00000334504 SSX9Q7RTT3 188 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ZER1Q7Z7L7 766 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ADAMTS19Q8TE59 1207 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 HRH4Q9H3N8 390 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 GPN2Q9H9Y4 310 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-201ENST00000334504 DLGAP4Q9Y2H0 992 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 LDB2O43679 373 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 BRINP1O60477 761 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ARHGEF15O94989 841 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 PBX2P40425 430 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF791Q3KP31 576 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-201ENST00000334504 MINDY1Q8N5J2 469 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 MYRFLQ96LU7 910 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 RXFP3Q9NSD7 469 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 GLTPQ9NZD2 209 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 CACNG4Q9UBN1 327 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 TRAV18A0A075B6X5 111 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 PIP5K1CO60331 668 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 AOC2O75106 756 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 GGT1P19440 569 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ACTBP60709 375 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ACTG1P63261 375 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 DACT2Q5SW24 774 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 AGAP6Q5VW22 663 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ARL14EPQ8N8R7 260 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-201ENST00000334504 SLC22A17Q8WUG5 538 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 SLC5A11Q8WWX8 675 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 SORCS1Q8WY21 1168 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 MED30Q96HR3 178 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 AGAP4Q96P64 663 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 LMF1Q96S06 567 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 FAM124BQ9H5Z6 455 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-201ENST00000334504 WASH6PQ9NQA3 447 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 GLOD5A6NK44 160 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 SERPINA7P05543 415 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ACP5P13686 325 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 CASP3P42574 277 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ZNF763Q0D2J5 394 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 VGLL4Q14135 290 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 DNAAF1Q8NEP3 725 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 GATA6Q92908 595 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 CNN2Q99439 309 aaKnown RBP9.39□□□□□ -0.91
COL4A6-201ENST00000334504 THAP7Q9BT49 309 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-201ENST00000334504 MROQ9BYG7 248 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 HEBP1Q9NRV9 189 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-201ENST00000334504 CLDND1Q9NY35 253 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 KLRF1Q9NZS2 232 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 ICKQ9UPZ9 632 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 PLEKHM1Q9Y4G2 1056 aa9.39□□□□□ -0.91
COL4A6-201ENST00000334504 SLC38A8A6NNN8 435 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 BEST1O76090 585 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 DIRAS3O95661 229 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 FHP07954 510 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 JUNDP17535 347 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 KCNC1P48547 511 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 APOFQ13790 326 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 CES4AQ5XG92 561 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 OR52E8Q6IFG1 317 aa9.38□□□□□ -0.91
COL4A6-201ENST00000334504 KCTD18Q6PI47 426 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-201ENST00000334504 OR4C15Q8NGM1 316 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms