RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 STK19P49842 368 aaPredicted RBP13.04□□□□□ -0.32
SYNE3-201ENST00000334258 AP1S2P56377 157 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 CTBP2P56545 445 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 B4GALNT1Q00973 533 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 ILKQ13418 452 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 SEC23BQ15437 767 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 CLVS2Q5SYC1 327 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 SHFQ7M4L6 423 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 OR7G3Q8NG95 312 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 DNAJA4Q8WW22 397 aaPredicted RBP13.04□□□□□ -0.32
SYNE3-201ENST00000334258 FOXJ1Q92949 421 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 MSANTD3Q96H12 275 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 MAGEB10Q96LZ2 347 aaPredicted RBP13.04□□□□□ -0.32
SYNE3-201ENST00000334258 SLC6A18Q96N87 628 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 MED28Q9H204 178 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 CCDC88CQ9P219 2028 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 HEPACAM2A8MVW5 462 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 OR7A10O76100 309 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 LIM2P55344 173 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 ZNF628Q5EBL2 1059 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 FUT10Q6P4F1 479 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 DGLUCYQ7Z3D6 616 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 TMPRSS11BQ86T26 416 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 DNAJC5GQ8N7S2 189 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 OR52I1Q8NGK6 324 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 UFD1Q92890 307 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 KIAA1143Q96AT1 154 aaPredicted RBP13.04□□□□□ -0.32
SYNE3-201ENST00000334258 FCRL1Q96LA6 429 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 CASD1Q96PB1 797 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 WRAP53Q9BUR4 548 aaKnown RBP13.04□□□□□ -0.32
SYNE3-201ENST00000334258 TMED9Q9BVK6 235 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 B3GAT2Q9NPZ5 323 aa13.04□□□□□ -0.32
SYNE3-201ENST00000334258 ANKDD1BA6NHY2 528 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 OR2AG2A6NM03 316 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 NPIPB8E9PQR5 432 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 FFAR1O14842 300 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 PRKYO43930 277 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 TGFB1P01137 390 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 BCHEP06276 602 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 C1SP09871 688 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 CSTF1Q05048 431 aaKnown RBP13.03□□□□□ -0.32
SYNE3-201ENST00000334258 ANGPT1Q15389 498 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 RETSATQ6NUM9 610 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 MCOLN1Q9GZU1 580 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 SEMA3GQ9NS98 782 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 MARCH5Q9NX47 278 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 ZNF224Q9NZL3 707 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 MGAT4AQ9UM21 535 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 MGAT4BQ9UQ53 548 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 GOLGA4Q13439 2230 aaKnown RBP13.03□□□□□ -0.32
SYNE3-201ENST00000334258 SYN3O14994 580 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 NME6O75414 186 aaPredicted RBP13.03□□□□□ -0.32
SYNE3-201ENST00000334258 H1F0P07305 194 aaKnown RBP13.03□□□□□ -0.32
SYNE3-201ENST00000334258 ZDHHC11BP0C7U3 371 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 LIMS1P48059 325 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 WNT4P56705 351 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 CLDN20P56880 219 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 WDR5P61964 334 aaKnown RBP13.03□□□□□ -0.32
SYNE3-201ENST00000334258 ABATP80404 500 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 DSC1Q08554 894 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 PUM1Q14671 1186 aaKnown RBP eCLIP13.03□□□□□ -0.32
SYNE3-201ENST00000334258 PLK5Q496M5 336 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 SPIN4Q56A73 249 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 CRB2Q5IJ48 1285 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 AGTRAPQ6RW13 159 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 SZRD1Q7Z422 152 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 DCLRE1CQ96SD1 692 aaKnown RBP13.03□□□□□ -0.32
SYNE3-201ENST00000334258 REV1Q9UBZ9 1251 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 NCKAP1Q9Y2A7 1128 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 PCDHGB7Q9Y5F8 929 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 NLRC5Q86WI3 1866 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 A0A1W2PRB8 838 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 PDPK1O15530 556 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 SLC43A1O75387 559 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 RFPL3O75679 317 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 SLC22A5O76082 557 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 GALTP07902 379 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 CPEP16870 476 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 ZNF763Q0D2J5 394 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 GPR17Q13304 367 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 GINS1Q14691 196 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 POU4F3Q15319 338 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 BCL2L15Q5TBC7 163 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 ZBTB37Q5TC79 503 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 CRTC1Q6UUV9 634 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 CEACAM20Q6UY09 585 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 C16orf62Q7Z3J2 963 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 APCDD1Q8J025 514 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 RAB8BQ92930 207 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 OTULINQ96BN8 352 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 BHLHE41Q9C0J9 482 aaPredicted RBP13.03□□□□□ -0.32
SYNE3-201ENST00000334258 OR51B5Q9H339 312 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 FZD3Q9NPG1 666 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 MIEF1Q9NQG6 463 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 DOCK6Q96HP0 2047 aa13.03□□□□□ -0.32
SYNE3-201ENST00000334258 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.02□□□□□ -0.32
SYNE3-201ENST00000334258 SHOXO15266 292 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 SEC14L5O43304 696 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 EOMESO95936 686 aa13.02□□□□□ -0.32
SYNE3-201ENST00000334258 ZNF30P17039 623 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms