RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 PRELID3BQ9Y3B1 194 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 A0A0D9SEW6 157 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 OR5K4A6NMS3 321 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 GPR171O14626 319 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 BTCP35070 178 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 DUSP6Q16828 381 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 GPRC6AQ5T6X5 926 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 HJURPQ8NCD3 748 aaPredicted RBP23.1■■□□□ 1.29
SOX1-201ENST00000330949 GATAD2BQ8WXI9 593 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 ACOT12Q8WYK0 555 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 BOCQ9BWV1 1114 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 SLC6A17Q9H1V8 727 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 KCTD5Q9NXV2 234 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 PLXNA4Q9HCM2 1894 aa23.1■■□□□ 1.29
SOX1-201ENST00000330949 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 SMAD6O43541 496 aaKnown RBP23.09■■□□□ 1.29
SOX1-201ENST00000330949 MMP12P39900 470 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 PTPN5P54829 565 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 SPDYE7PQ495Y7 208 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 COX20Q5RI15 118 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 MORN1Q5T089 497 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 CD300LGQ6UXG3 332 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 RRM2BQ7LG56 351 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 NEIL3Q8TAT5 605 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 CHFRQ96EP1 664 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 GIMAP5Q96F15 307 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 FUBP3Q96I24 572 aaKnown RBP eCLIP23.09■■□□□ 1.29
SOX1-201ENST00000330949 ZSCAN32Q9NX65 697 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 IL17CQ9P0M4 197 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 TRBC2A0A5B9 178 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 GABRR3A8MPY1 467 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 LRRTM2O43300 516 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 NCR1O76036 304 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 IGFBP1P08833 259 aaPredicted RBP23.09■■□□□ 1.29
SOX1-201ENST00000330949 ELK1P19419 428 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 RPL9P32969 192 aaKnown RBP23.09■■□□□ 1.29
SOX1-201ENST00000330949 MVDP53602 400 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 CRYZQ08257 329 aaKnown RBP23.09■■□□□ 1.29
SOX1-201ENST00000330949 LRRC74AQ0VAA2 488 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 NHLRC3Q5JS37 347 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 THEM5Q8N1Q8 247 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 CLDN19Q8N6F1 224 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 MYEOVQ96EZ4 313 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 C1QTNF6Q9BXI9 259 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 ZNF436Q9C0F3 470 aaPredicted RBP23.09■■□□□ 1.29
SOX1-201ENST00000330949 TRPM5Q9NZQ8 1165 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 VPS29Q9UBQ0 182 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 KLF2Q9Y5W3 355 aaPredicted RBP23.09■■□□□ 1.29
SOX1-201ENST00000330949 TRBV4-1A0A0J9YWV2 114 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 TLX2O43763 284 aaPredicted RBP23.09■■□□□ 1.29
SOX1-201ENST00000330949 PRKYO43930 277 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 SULT1A3P0DMM9 295 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 SULT1A4P0DMN0 295 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 PEPDP12955 493 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 SLC6A4P31645 630 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 COX10Q12887 443 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 SPRYD7Q5W111 196 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 TMEM91Q6ZNR0 172 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 ATAD1Q8NBU5 361 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 TMEM38AQ9H6F2 299 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 GPATCH2Q9NW75 528 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 TVP23BQ9NYZ1 205 aa23.09■■□□□ 1.29
SOX1-201ENST00000330949 LOC105369274A0A096LPK9 316 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 IRGMA1A4Y4 181 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 LANCL1O43813 399 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 ASMTP46597 345 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 CASP9P55211 416 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 CDK6Q00534 326 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 ACSM2AQ08AH3 577 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 ACSM2BQ68CK6 577 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 LRFN4Q6PJG9 635 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 UNC5DQ6UXZ4 953 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 ZNF280BQ86YH2 543 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 OR4N4Q8N0Y3 316 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 POLR2J3Q9H1A7 115 aaKnown RBP23.08■■□□□ 1.29
SOX1-201ENST00000330949 ENAMQ9NRM1 1142 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 ZNF624Q9P2J8 865 aaPredicted RBP23.08■■□□□ 1.29
SOX1-201ENST00000330949 SCML2Q9UQR0 700 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 NLRC5Q86WI3 1866 aa23.08■■□□□ 1.29
SOX1-201ENST00000330949 SLC22A23A1A5C7 686 aa23.08■■□□□ 1.28
SOX1-201ENST00000330949 TCRBP04435 133 aa23.08■■□□□ 1.28
SOX1-201ENST00000330949 LCN1P31025 176 aa23.08■■□□□ 1.28
SOX1-201ENST00000330949 PTPRRQ15256 657 aa23.08■■□□□ 1.28
SOX1-201ENST00000330949 SYT14P1Q58G82 188 aa23.08■■□□□ 1.28
SOX1-201ENST00000330949 SLC25A30Q5SVS4 291 aa23.08■■□□□ 1.28
SOX1-201ENST00000330949 HACD4Q5VWC8 232 aa23.08■■□□□ 1.28
SOX1-201ENST00000330949 RETSATQ6NUM9 610 aa23.08■■□□□ 1.28
SOX1-201ENST00000330949 CAMKMTQ7Z624 323 aa23.08■■□□□ 1.28
SOX1-201ENST00000330949 POLDIP3Q9BY77 421 aaKnown RBP23.08■■□□□ 1.28
SOX1-201ENST00000330949 MAGEH1Q9H213 219 aa23.08■■□□□ 1.28
SOX1-201ENST00000330949 CD93Q9NPY3 652 aa23.08■■□□□ 1.28
SOX1-201ENST00000330949 PPIEQ9UNP9 301 aaKnown RBP23.08■■□□□ 1.28
SOX1-201ENST00000330949 NUPL2O15504 423 aaKnown RBP23.07■■□□□ 1.28
SOX1-201ENST00000330949 HLA-DPB1P04440 258 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 AHCYP23526 432 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 VSX2P58304 361 aaPredicted RBP23.07■■□□□ 1.28
SOX1-201ENST00000330949 RASSF6Q6ZTQ3 369 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 FGD2Q7Z6J4 655 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 FTMTQ8N4E7 242 aa23.07■■□□□ 1.28
SOX1-201ENST00000330949 UXS1Q8NBZ7 420 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms