RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 UCN3Q969E3 161 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 GTPBP3Q969Y2 492 aaKnown RBP13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 RHNO1Q9BSD3 238 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 C12orf65Q9H3J6 166 aaKnown RBP13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 MOCS1Q9NZB8 636 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 GRHL1Q9NZI5 618 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 CLDN16Q9Y5I7 305 aa13.43□□□□□ -0.26
CTHRC1-201ENST00000330295 IGHV4-30-2A0A087WSY4 118 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 TP73O15350 636 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 SMNDC1O75940 238 aaKnown RBP eCLIP13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 F7P08709 466 aaPredicted RBP13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 SAT1P21673 171 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 GABRB3P28472 473 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 GRK3P35626 688 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 CDK9P50750 372 aaKnown RBP13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 GUCY2DQ02846 1103 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 PWP1Q13610 501 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 FAM120AOSQ5T036 256 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 CYB5R2Q6BCY4 276 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 PAQR3Q6TCH7 311 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 PIWIL4Q7Z3Z4 852 aaKnown RBP13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 MMGT1Q8N4V1 131 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 RFLNBQ8N5W9 214 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 C3orf56Q8N813 242 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 CEP112Q8N8E3 955 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 OR5L2Q8NGL0 311 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 OR8K3Q8NH51 312 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 GIMAP7Q8NHV1 300 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 FBXO25Q8TCJ0 367 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 EEF1AKMT1Q8WVE0 214 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 WNT2BQ93097 391 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 ABTB1Q969K4 478 aaPredicted RBP13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 LINGO1Q96FE5 620 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 TSPAN17Q96FV3 270 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 TUBA1CQ9BQE3 449 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 PCBD2Q9H0N5 130 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 PARVBQ9HBI1 364 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 SH2B3Q9UQQ2 575 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 MED16Q9Y2X0 877 aa13.42□□□□□ -0.26
CTHRC1-201ENST00000330295 C16orf97H3BN30 126 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 KLF4O43474 513 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 NDUFS7O75251 213 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 ACSL3O95573 720 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 HPNP05981 417 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 SOD3P08294 240 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 POU2F1P14859 743 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 ITGA2P17301 1181 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 STX2P32856 288 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 MAGEA4P43358 317 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 CDKN2DP55273 166 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 SLC7A5Q01650 507 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 LOXL1Q08397 574 aaPredicted RBP13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 ELAVL1Q15717 326 aaKnown RBP13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 PDCD2Q16342 344 aaPredicted RBP13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 RBM20Q5T481 1227 aaKnown RBP13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 ZNF474Q6S9Z5 364 aaPredicted RBP13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 CYHR1Q6ZMK1 362 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 ADGRE4PQ86SQ3 457 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 ZC3HC1Q86WB0 502 aaKnown RBP13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 CTAGE3PQ8IX95 158 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 NKAPQ8N5F7 415 aaKnown RBP13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 ZNF321PQ8N8H1 164 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 ATL1Q8WXF7 558 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 AKAP1Q92667 903 aaKnown RBP eCLIP13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 CAVIN3Q969G5 261 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 ZNF597Q96LX8 424 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 CPNE1Q99829 537 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 TMEM204Q9BSN7 226 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 LRRC1Q9BTT6 524 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 DOHHQ9BU89 302 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 RHOJQ9H4E5 214 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 PLAC1Q9HBJ0 212 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 CCDC177Q9NQR7 707 aaPredicted RBP13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 ELOVL5Q9NYP7 299 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 CNIH4Q9P003 139 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 CLCA3PQ9Y6N3 262 aa13.41□□□□□ -0.26
CTHRC1-201ENST00000330295 A0A1W2PNV4 684 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 SERPIND1P05546 499 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 HNF1AP20823 631 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 CCND1P24385 295 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 IMPA1P29218 277 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 SSTR1P30872 391 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 AP1S2P56377 157 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 POU4F1Q01851 419 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 ASPHQ12797 758 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 MPEG1Q2M385 716 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 PIGGQ5H8A4 983 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 PRR31Q5SQ13 230 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 CA13Q8N1Q1 262 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 UTP15Q8TED0 518 aaKnown RBP13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 DAZLQ92904 295 aaKnown RBP13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 SPACA9Q96E40 222 aaPredicted RBP13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 HS6ST2Q96MM7 605 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 UCN2Q96RP3 112 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 OR8D2Q9GZM6 311 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 UBQLN3Q9H347 655 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 BARX1Q9HBU1 254 aaPredicted RBP13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 PRTFDC1Q9NRG1 225 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 SLC17A6Q9P2U8 582 aa13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 LIPT1Q9Y234 373 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms