RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 OR5K2Q8NHB8 316 aa15.2■□□□□ 0.02
SYNM-201ENST00000328642 GPR34Q9UPC5 381 aa15.2■□□□□ 0.02
SYNM-201ENST00000328642 GSTK1Q9Y2Q3 226 aa15.2■□□□□ 0.02
SYNM-201ENST00000328642 H0YIV9 168 aa15.2■□□□□ 0.02
SYNM-201ENST00000328642 OR5F1O95221 314 aa15.2■□□□□ 0.02
SYNM-201ENST00000328642 NKX3-2P78367 333 aa15.2■□□□□ 0.02
SYNM-201ENST00000328642 DLX2Q07687 328 aaPredicted RBP15.2■□□□□ 0.02
SYNM-201ENST00000328642 CDK5R2Q13319 367 aa15.2■□□□□ 0.02
SYNM-201ENST00000328642 DNASE1L3Q13609 305 aa15.2■□□□□ 0.02
SYNM-201ENST00000328642 CLCA4Q14CN2 919 aa15.2■□□□□ 0.02
SYNM-201ENST00000328642 TMEM126BQ8IUX1 230 aa15.2■□□□□ 0.02
SYNM-201ENST00000328642 PIP5K1AQ99755 562 aa15.2■□□□□ 0.02
SYNM-201ENST00000328642 TAS2R16Q9NYV7 291 aa15.2■□□□□ 0.02
SYNM-201ENST00000328642 BTNL2Q9UIR0 455 aa15.2■□□□□ 0.02
SYNM-201ENST00000328642 ATG4BQ9Y4P1 393 aa15.2■□□□□ 0.02
SYNM-201ENST00000328642 RETP07949 1114 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 CLCN2P51788 898 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 DUSP7Q16829 419 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 PYDC2Q56P42 97 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 RTL4Q6ZR62 310 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 OR4K5Q8NGD3 323 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 RPL3LQ92901 407 aaKnown RBP15.19■□□□□ 0.02
SYNM-201ENST00000328642 PREBQ9HCU5 417 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 ABCD2Q9UBJ2 740 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 CCDC88CQ9P219 2028 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 HOXC11O43248 304 aaPredicted RBP15.19■□□□□ 0.02
SYNM-201ENST00000328642 ALPLP05186 524 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 OPRD1P41143 372 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 SLC6A12P48065 614 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 HLCSP50747 726 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 MAZP56270 477 aaKnown RBP15.19■□□□□ 0.02
SYNM-201ENST00000328642 NKG7Q16617 165 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 NDUFA9Q16795 377 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 TMEM196Q5HYL7 178 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 SPATC1Q76KD6 591 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 KBTBD8Q8NFY9 601 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 OR56A3Q8NH54 315 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 PHOSPHO1Q8TCT1 267 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 RASSF5Q8WWW0 418 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 ZNF385DQ9H6B1 395 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 STOML2Q9UJZ1 356 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 MIA3Q5JRA6 1907 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 BLOC1S5-TXNDC5H3BN57 136 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 SLC25A12O75746 678 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 HOXB3P14651 431 aaPredicted RBP15.19■□□□□ 0.02
SYNM-201ENST00000328642 FADDQ13158 208 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 FAM111BQ6SJ93 734 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 LAPTM4BQ86VI4 370 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 TMED9Q9BVK6 235 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 MVB12BQ9H7P6 319 aa15.19■□□□□ 0.02
SYNM-201ENST00000328642 PPIEQ9UNP9 301 aaKnown RBP15.19■□□□□ 0.02
SYNM-201ENST00000328642 DDCP20711 480 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 CSTF2P33240 577 aaKnown RBP eCLIP15.18■□□□□ 0.02
SYNM-201ENST00000328642 MAT1AQ00266 395 aaKnown RBP15.18■□□□□ 0.02
SYNM-201ENST00000328642 DUSP6Q16828 381 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 LIPKQ5VXJ0 399 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 FOXB2Q5VYV0 432 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 TRIQKQ629K1 86 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 NRROSQ86YC3 692 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 OR51G2Q8NGK0 314 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 TESCQ96BS2 214 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 FAM46AQ96IP4 442 aaKnown RBP15.18■□□□□ 0.02
SYNM-201ENST00000328642 ZNF300Q96RE9 604 aaPredicted RBP15.18■□□□□ 0.02
SYNM-201ENST00000328642 MAPKAP1Q9BPZ7 522 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 OSBPL10Q9BXB5 764 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 NMNAT1Q9HAN9 279 aaPredicted RBP15.18■□□□□ 0.02
SYNM-201ENST00000328642 ZNF624Q9P2J8 865 aaPredicted RBP15.18■□□□□ 0.02
SYNM-201ENST00000328642 DOCK8Q8NF50 2099 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 FAM86C2PA6NEL3 165 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 SLC9B1P1A6NJY1 282 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 DUXAA6NLW8 204 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 KLK8O60259 260 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 PRAMEF4O60810 478 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 TSC22D2O75157 780 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 SLC5A2P31639 672 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 PRAMEF9Q5VWM5 478 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 CPZQ66K79 652 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 SLC30A6Q6NXT4 461 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 TMEM179BQ7Z7N9 219 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 LUZP2Q86TE4 346 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 RANBP3LQ86VV4 465 aaPredicted RBP15.18■□□□□ 0.02
SYNM-201ENST00000328642 CYB561A3Q8NBI2 242 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 OR52P1PQ8NH57 321 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 BORCS5Q969J3 196 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 RHNO1Q9BSD3 238 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 BRF2Q9HAW0 419 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 BRD7Q9NPI1 651 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 HIST1H1TP22492 207 aaPredicted RBP15.18■□□□□ 0.02
SYNM-201ENST00000328642 CSNK1EP49674 416 aaKnown RBP15.18■□□□□ 0.02
SYNM-201ENST00000328642 FAM43BQ6ZT52 329 aaPredicted RBP15.18■□□□□ 0.02
SYNM-201ENST00000328642 SIX5Q8N196 739 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 OR13H1Q8NG92 308 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 OR9A4Q8NGU2 314 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 PIK3R3Q92569 461 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 HDAC2Q92769 488 aaKnown RBP15.18■□□□□ 0.02
SYNM-201ENST00000328642 DIRAS2Q96HU8 199 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 DGAT2Q96PD7 388 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 CRISPLD2Q9H0B8 497 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 GORASP2Q9H8Y8 452 aa15.18■□□□□ 0.02
SYNM-201ENST00000328642 MRPS17Q9Y2R5 130 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms