RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 PGBD2Q6P3X8 592 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 PODNL1Q6PEZ8 512 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 LRRTM4Q86VH4 590 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 COMTD1Q86VU5 262 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 CAPSLQ8WWF8 208 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 DPH7Q9BTV6 452 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 TRMT61BQ9BVS5 477 aaKnown RBP13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 NEUROD4Q9HD90 331 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 RWDD3Q9Y3V2 267 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 DENND4CQ5VZ89 1909 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 PLXND1Q9Y4D7 1925 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 C17orf113A0A1B0GUU1 675 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 RFXAPO00287 272 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 SLC15A1P46059 708 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 MLLT1Q03111 559 aaPredicted RBP13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 GINS1Q14691 196 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 GPAT3Q53EU6 434 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 RSBN1Q5VWQ0 802 aaPredicted RBP13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 USP30Q70CQ3 517 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 HCAR2Q8TDS4 363 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 GPR151Q8TDV0 419 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 RGMAQ96B86 450 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 C12orf66Q96MD2 445 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 SERHL2Q9H4I8 314 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 TIGARQ9NQ88 270 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 SIRT3Q9NTG7 399 aaPredicted RBP13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 KCNK6Q9Y257 313 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 GPR52Q9Y2T5 361 aa13.3□□□□□ -0.28
ATP2C1-201ENST00000328560 HTR3EA5X5Y0 456 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 TFECO14948 347 aaPredicted RBP13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 LRRTM2O43300 516 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 VEGFDO43915 354 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 PRKYO43930 277 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 PPP2R1BP30154 601 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 CSTF2P33240 577 aaKnown RBP eCLIP13.29□□□□□ -0.284e-21■■■■■ 61.4
ATP2C1-201ENST00000328560 KCNJ5P48544 419 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 RUNX1T1Q06455 604 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 GPR19Q15760 415 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 ZMAT1Q5H9K5 638 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 NDUFAF5Q5TEU4 345 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 SHFQ7M4L6 423 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 CCDC116Q8IYX3 515 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 SLC7A5P1Q8MH63 180 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 JPH3Q8WXH2 748 aaPredicted RBP13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 TRMT61AQ96FX7 289 aaKnown RBP13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 ZNF354BQ96LW1 612 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 TEFMQ96QE5 360 aaKnown RBP13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 SMURF1Q9HCE7 757 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 A4GALTQ9NPC4 353 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 FBXW2Q9UKT8 454 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 GPR34Q9UPC5 381 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 ICKQ9UPZ9 632 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 LINC00271P0C7V0 271 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 CD72P21854 359 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 P2RY2P41231 377 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 ILKQ13418 452 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 C1DQ13901 141 aaKnown RBP13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 SNAPC1Q16533 368 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 FAM46CQ5VWP2 391 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 SLC30A8Q8IWU4 369 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 YAF2Q8IY57 180 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 UBE2J2Q8N2K1 259 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 OR4K5Q8NGD3 323 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 LRR1Q96L50 414 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 QRFPRQ96P65 431 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 P2RX2Q9UBL9 471 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 RPL36Q9Y3U8 105 aaKnown RBP13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 PRAMEF27A3QJZ7 478 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 FAAHO00519 579 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 RPN2P04844 631 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 GSTT2P0CG29 244 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 GSTT2BP0CG30 244 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 RCVRNP35243 200 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 ALDH6A1Q02252 535 aaKnown RBP13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 MAP4K2Q12851 820 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 CLEC12AQ5QGZ9 265 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 ARMC4Q5T2S8 1044 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 KRT73Q86Y46 540 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 KLHL31Q9H511 634 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 SIAEQ9HAT2 523 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 LHX9Q9NQ69 397 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 CRNNQ9UBG3 495 aaPredicted RBP13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 KCND3Q9UK17 655 aa13.29□□□□□ -0.28
ATP2C1-201ENST00000328560 ATG2BQ96BY7 2078 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 A8MV72 311 aaPredicted RBP13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 A8MVJ9 347 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 CDRT1O95170 752 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 NTN1O95631 604 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 HOXB3P14651 431 aaPredicted RBP13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 CDC20Q12834 499 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 SLX4IPQ5VYV7 408 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 TMEM53Q6P2H8 277 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 PSRC1Q6PGN9 363 aaPredicted RBP13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 LAX1Q8IWV1 398 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 RAB42Q8N4Z0 105 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 OR6T1Q8NGN1 323 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 OR8J1Q8NGP2 316 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 OR8K5Q8NH50 307 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 OTULINQ96BN8 352 aa13.28□□□□□ -0.28
ATP2C1-201ENST00000328560 TRNT1Q96Q11 434 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms