RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 XKP51811 444 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 LTB4RQ15722 352 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 DUSP7Q16829 419 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 DEFB133Q30KQ1 61 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 FAHD1Q6P587 224 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 OGFOD3Q6PK18 319 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 THAP5Q7Z6K1 395 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 GALNT5Q7Z7M9 940 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 SATL1Q86VE3 508 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 SDR16C5Q8N3Y7 309 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 PIK3C3Q8NEB9 887 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 NUP43Q8NFH3 380 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 DNASE2BQ8WZ79 361 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 ZNF607Q96SK3 696 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 SLC38A3Q99624 504 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 YIPF4Q9BSR8 244 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 GRIP2Q9C0E4 1043 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 STARD5Q9NSY2 213 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 KIF17Q9P2E2 1029 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 THEGQ9P2T0 379 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 NAALAD2Q9Y3Q0 740 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 ENPP4Q9Y6X5 453 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 SPACA6W5XKT8 324 aa14.06□□□□□ -0.16
TPM3-205ENST00000328159 SCN2AQ99250 2005 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 THADAQ6YHU6 1953 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 LOC100130705A0A1B0GUX0 176 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 TRIM64A6NGJ6 449 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 SLC16A6O15403 523 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 SDC3O75056 442 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 RECKO95980 971 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 YAP1P46937 504 aaKnown RBP14.05□□□□□ -0.16
TPM3-205ENST00000328159 NR1H2P55055 460 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 CDH15P55291 814 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 TPD52P55327 224 aaPredicted RBP14.05□□□□□ -0.16
TPM3-205ENST00000328159 C21orf59P57076 290 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 TUBA4AP68366 448 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 SPIBQ01892 262 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 KCNC4Q03721 635 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 DMWDQ09019 674 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 DEFB110Q30KQ9 67 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 USP53Q70EK8 1073 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 ATG16L2Q8NAA4 619 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 OR4C15Q8NGM1 316 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 BBS10Q8TAM1 723 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 KAT2AQ92830 837 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 OTUB1Q96FW1 271 aaPredicted RBP14.05□□□□□ -0.16
TPM3-205ENST00000328159 C16orf58Q96GQ5 468 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 COL21A1Q96P44 957 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 PIP5K1AQ99755 562 aa14.05□□□□□ -0.16
TPM3-205ENST00000328159 TREX2Q9BQ50 279 aaPredicted RBP14.05□□□□□ -0.16
TPM3-205ENST00000328159 SMIM31A0A1B0GVY4 71 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 JRKO75564 520 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 SERPINB7O75635 380 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 IFNW1P05000 195 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 FESP07332 822 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 CRISP3P54108 245 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 IL1RL1Q01638 556 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 IL18R1Q13478 541 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 COL9A2Q14055 689 aaPredicted RBP14.04□□□□□ -0.16
TPM3-205ENST00000328159 NADK2Q4G0N4 442 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 WDR45BQ5MNZ6 344 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 MCATQ8IVS2 390 aaKnown RBP14.04□□□□□ -0.16
TPM3-205ENST00000328159 OR4N5Q8IXE1 308 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 CA13Q8N1Q1 262 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 GPR32P1Q8NGA4 272 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 GIPC3Q8TF64 312 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 APOBEC4Q8WW27 367 aaKnown RBP14.04□□□□□ -0.16
TPM3-205ENST00000328159 RASSF5Q8WWW0 418 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 PROX1Q92786 737 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 OR7D2Q96RA2 312 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 MAP3K3Q99759 626 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 ING2Q9H160 280 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 DUSP15Q9H1R2 295 aaPredicted RBP14.04□□□□□ -0.16
TPM3-205ENST00000328159 EPB41L1Q9H4G0 881 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 RIBC2Q9H4K1 309 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 BCL2L10Q9HD36 194 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 DNAAF2Q9NVR5 837 aaKnown RBP14.04□□□□□ -0.16
TPM3-205ENST00000328159 TUBA8Q9NY65 449 aaPredicted RBP14.04□□□□□ -0.16
TPM3-205ENST00000328159 NDUFA13Q9P0J0 144 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 FAM32AQ9Y421 112 aaKnown RBP14.04□□□□□ -0.16
TPM3-205ENST00000328159 GPC6Q9Y625 555 aaPredicted RBP14.04□□□□□ -0.16
TPM3-205ENST00000328159 NINQ8N4C6 2090 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 A0A087WXM4 84 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 J3KTA2 159 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 BCAT2O15382 392 aaPredicted RBP14.04□□□□□ -0.16
TPM3-205ENST00000328159 UGT2B11O75310 529 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 PIAS2O75928 621 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 CPMP14384 443 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 RHCEP18577 417 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 CDH2P19022 906 aaPredicted RBP14.04□□□□□ -0.16
TPM3-205ENST00000328159 POLR2IP36954 125 aaKnown RBP14.04□□□□□ -0.16
TPM3-205ENST00000328159 KCNJ5P48544 419 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 CDH12P55289 794 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 MLLT1Q03111 559 aaPredicted RBP14.04□□□□□ -0.16
TPM3-205ENST00000328159 FUT5Q11128 374 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 GNA13Q14344 377 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 PUM1Q14671 1186 aaKnown RBP eCLIP14.04□□□□□ -0.161e-11■■□□□ 12.1
TPM3-205ENST00000328159 C14orf28Q4W4Y0 310 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 FAM92BQ6ZTR7 304 aa14.04□□□□□ -0.16
TPM3-205ENST00000328159 KRT73Q86Y46 540 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms