RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 HNMTP50135 292 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 SGSHP51688 502 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 PTPN5P54829 565 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 PFN3P60673 137 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 IRF8Q02556 426 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 DSC1Q08554 894 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 TUSC3Q13454 348 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 MRPL58Q14197 206 aaKnown RBP12.13□□□□□ -0.47
CCDC60-201ENST00000327554 USP45Q70EL2 814 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 KIAA0907Q7Z7F0 614 aaPredicted RBP12.13□□□□□ -0.47
CCDC60-201ENST00000327554 LUZP2Q86TE4 346 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 OXR1Q8N573 874 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 MS4A15Q8N5U1 240 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 GPRC5AQ8NFJ5 357 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 LRR1Q96L50 414 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 UBL7Q96S82 380 aaPredicted RBP12.13□□□□□ -0.47
CCDC60-201ENST00000327554 WRAP53Q9BUR4 548 aaKnown RBP12.13□□□□□ -0.47
CCDC60-201ENST00000327554 C1QTNF6Q9BXI9 259 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 GSX2Q9BZM3 304 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 ATG10Q9H0Y0 220 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 ABCG5Q9H222 651 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 CDCP1Q9H5V8 836 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 FGF20Q9NP95 211 aaPredicted RBP12.13□□□□□ -0.47
CCDC60-201ENST00000327554 LYARQ9NX58 379 aaKnown RBP12.13□□□□□ -0.47
CCDC60-201ENST00000327554 RDH8Q9NYR8 311 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 EXTL2Q9UBQ6 330 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 MAP4K5Q9Y4K4 846 aa12.13□□□□□ -0.47
CCDC60-201ENST00000327554 SLC19A2O60779 497 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 OR12D1P0DN82 309 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 GAAP10253 952 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 CHI3L1P36222 383 aaPredicted RBP12.12□□□□□ -0.47
CCDC60-201ENST00000327554 RAB14P61106 215 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 MRPS6P82932 125 aaKnown RBP12.12□□□□□ -0.47
CCDC60-201ENST00000327554 ZNF33BQ06732 778 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 ZNF273Q14593 569 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 ZMYND11Q15326 602 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 SLC5A12Q1EHB4 618 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 LYPLAL1Q5VWZ2 237 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 LIPJQ5W064 366 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 RAET1GQ6H3X3 334 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 NXPE1Q8N323 547 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 ZNF485Q8NCK3 441 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 OR7G3Q8NG95 312 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 OR5AK3PQ8NH89 298 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 ASB11Q8WXH4 323 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 MYO19Q96H55 970 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 MS4A3Q96HJ5 214 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 OR2M2Q96R28 347 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 ARHGAP9Q9BRR9 750 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 TINF2Q9BSI4 451 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 BHLHE41Q9C0J9 482 aaPredicted RBP12.12□□□□□ -0.47
CCDC60-201ENST00000327554 SHARPINQ9H0F6 387 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 ZC4H2Q9NQZ6 224 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 TAS2R7Q9NYW3 318 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 ADAM30Q9UKF2 790 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 PCDHB8Q9UN66 801 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 UTRNP46939 3433 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 GLYATL1P3A0A0U1RQE8 302 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 hCG_1807616A0A1W2PRN6 198 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 MGAT4DA6NG13 374 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 LIMS3P0CW19 117 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 LIMS4P0CW20 117 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 EFNB1P98172 346 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 INSL4Q14641 139 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 DUSP6Q16828 381 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 DCST1Q5T197 706 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 MARCH9Q86YJ5 346 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 NEIL3Q8TAT5 605 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 SLC16A10Q8TF71 515 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 RFT1Q96AA3 541 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 NXPE2Q96DL1 559 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 THAP7Q9BT49 309 aaPredicted RBP12.12□□□□□ -0.47
CCDC60-201ENST00000327554 ZFYVE1Q9HBF4 777 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 MRPS18AQ9NVS2 196 aaKnown RBP12.12□□□□□ -0.47
CCDC60-201ENST00000327554 ATP6V1HQ9UI12 483 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 ANGPT4Q9Y264 503 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 CACNG2Q9Y698 323 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 CSNK1G3Q9Y6M4 447 aa12.12□□□□□ -0.47
CCDC60-201ENST00000327554 MEIKINA0A087WXM9 373 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 A0A1W2PRG6 482 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 G3V3Q6 166 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 FAAHO00519 579 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 SH3BP5O60239 455 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 C8GP07360 202 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 HIST1H2AGP0C0S8 130 aaPredicted RBP12.11□□□□□ -0.47
CCDC60-201ENST00000327554 ZNF8P17098 575 aaPredicted RBP12.11□□□□□ -0.47
CCDC60-201ENST00000327554 HIST1H2ADP20671 130 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 DNASE1P24855 282 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 CCL23P55773 120 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 CRYZQ08257 329 aaKnown RBP12.11□□□□□ -0.47
CCDC60-201ENST00000327554 LRRC74AQ0VAA2 488 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 DOC2AQ14183 400 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 NTRK2Q16620 822 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 TUSC1Q2TAM9 212 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 SHEQ5VZ18 495 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 ACSM5Q6NUN0 579 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 TCTN3Q6NUS6 607 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 TRIM40Q6P9F5 258 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 CFAP77Q6ZQR2 320 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 CHMP1BQ7LBR1 199 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms