RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ZNF541Q9H0D2 1346 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 IMPA2O14732 288 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 ARL6IP5O75915 188 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 ATP1B2P14415 290 aaPredicted RBP7.58□□□□□ -1.2
CIITA-201ENST00000324288 PTP4A2Q12974 167 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 GDPD4Q6W3E5 623 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 TMEM121BQ9BXQ6 578 aaPredicted RBP7.58□□□□□ -1.2
CIITA-201ENST00000324288 HRH4Q9H3N8 390 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 WNT6Q9Y6F9 365 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 SYN3O14994 580 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 TICAM1Q8IUC6 712 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 FBXO27Q8NI29 283 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 OR1F2PQ96R84 312 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 BCAS3Q9H6U6 928 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 KCNK12Q9HB15 430 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 ZDHHC18Q9NUE0 388 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 OR6C2Q9NZP2 312 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 ADAMTS3O15072 1205 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 CREBL2O60519 120 aaPredicted RBP7.58□□□□□ -1.2
CIITA-201ENST00000324288 IFNA1P01562 189 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 GAS6Q14393 721 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 MBLAC2Q68D91 279 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 TMEM125Q96AQ2 219 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 CMKLR1Q99788 373 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 C17orf62Q9BQA9 187 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 SIX2Q9NPC8 291 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 PCTPQ9UKL6 214 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 UCHL1P09936 223 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 NME2P22392 152 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 POU4F2Q12837 409 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 FRG2Q64ET8 278 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 TSPAN33Q86UF1 283 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 TSPEARQ8WU66 669 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 SNAPC3Q92966 411 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 FRG2BQ96QU4 278 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 SMOXQ9NWM0 555 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 STUB1Q9UNE7 303 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 PI15O43692 258 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 SOX30O94993 753 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 INHAP05111 366 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 IDH3GP51553 393 aaPredicted RBP7.58□□□□□ -1.2
CIITA-201ENST00000324288 CASP7P55210 303 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 CYP1B1Q16678 543 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 SOWAHAQ2M3V2 549 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 GSG1LQ6UXU4 331 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 GPR149Q86SP6 731 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 BBS1Q8NFJ9 593 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 FBXL18Q96ME1 805 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 NELL2Q99435 816 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 CACNG6Q9BXT2 260 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 COPS3Q9UNS2 423 aa7.58□□□□□ -1.2
CIITA-201ENST00000324288 ZNF850A8MQ14 1090 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 SLC7A4O43246 635 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 PAHP00439 452 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 TIGD5Q53EQ6 642 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 DCST2Q5T1A1 773 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 TRAPPC6BQ86SZ2 158 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 FBXL16Q8N461 479 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 EPYCQ99645 322 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 ABCG5Q9H222 651 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 H0YAE9 185 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 OR12D1P0DN82 309 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 PNLIPRP1P54315 467 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 TEAD2Q15562 447 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 BCL2A1Q16548 175 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 FLYWCH1Q4VC44 716 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 OR6N2Q8NGY6 317 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 WDR20Q8TBZ3 569 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 IRGQQ8WZA9 623 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 MR1Q95460 341 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 A0A1W2PQ45 241 aaPredicted RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 A0A1W2PQY0 241 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 LCMT2O60294 686 aaKnown RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 CD3GP09693 182 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 RD3LP0DJH9 198 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 MAPK3P27361 379 aaPredicted RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 VGLL2Q8N8G2 317 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 TERB2Q8NHR7 220 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 C3orf49Q96BT1 292 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 C16orf58Q96GQ5 468 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 MCHR1Q99705 422 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 TGIF2Q9GZN2 237 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 CA5BQ9Y2D0 317 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 UBE2J1Q9Y385 318 aaPredicted RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 PCDHB11Q9Y5F2 797 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 PCDHGA2Q9Y5H1 932 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 PEX12O00623 359 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 SYNGR4O95473 234 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 FBXO45P0C2W1 286 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 GSTM3P21266 225 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 MMP14P50281 582 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 NDUFA6P56556 154 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 SQSTM1Q13501 440 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 GK3PQ14409 553 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 LRIT3Q3SXY7 679 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 OR2A12Q8NGT7 310 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 OR5H6Q8NGV6 325 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 GLYATL2Q8WU03 294 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 BIRC8Q96P09 236 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 HNRNPABQ99729 332 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms