RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 CLEC2DQ9UHP7 191 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 MIA3Q5JRA6 1907 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 CARNS1A5YM72 827 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 CTSCP53634 463 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 EIF4EBP2Q13542 120 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF791Q3KP31 576 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 PLCZ1Q86YW0 608 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 KLBQ86Z14 1044 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 SLC7A6Q92536 515 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF689Q96CS4 500 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 TM9SF2Q99805 663 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 CDCA4Q9BXL8 241 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 TLR9Q9NR96 1032 aa12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 TRIP12Q14669 1992 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-202ENST00000321117 EEF1E1O43324 174 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 CRYZL1O95825 349 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 EPHX1P07099 455 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ANXA3P12429 323 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 HOXA9P31269 272 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF81P51508 661 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 BLVRAP53004 296 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 RACK1P63244 317 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 RGS1Q08116 209 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ADGRD2Q7Z7M1 963 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 C7orf57Q8NEG2 295 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 SNX33Q8WV41 574 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 C17orf62Q9BQA9 187 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 C11orf54Q9H0W9 315 aaPredicted RBP12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 TMEM39AQ9NV64 488 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF226Q9NYT6 803 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 PRKAG2Q9UGJ0 569 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 SCN4AP35499 1836 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 TSPAN4O14817 238 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 PRODHO43272 600 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ZDHHC11BP0C7U3 371 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 PTNP21246 168 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 HSD17B2P37059 387 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 OR2G6Q5TZ20 316 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 SLX4IPQ5VYV7 408 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 SLC8B1Q6J4K2 584 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 HSD11B1LQ7Z5J1 315 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 KREMEN2Q8NCW0 462 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF480Q8WV37 535 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 NDC1Q9BTX1 674 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 SORBS1Q9BX66 1292 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 TXNL4BQ9NX01 149 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 MRPS23Q9Y3D9 190 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 CSO75390 466 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 PCCBP05166 539 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 C8orf89P0DMQ9 161 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ATF4P18848 351 aaPredicted RBP12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 TGFBR2P37173 567 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 SLC6A12P48065 614 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF852Q6ZMS4 543 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF438Q7Z4V0 828 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ANKK1Q8NFD2 765 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 WFDC5Q8TCV5 224 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 PIGKQ92643 395 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ARHGAP39Q9C0H5 1083 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 BEX1Q9HBH7 125 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 GPN1Q9HCN4 374 aaPredicted RBP12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 GPSM3Q9Y4H4 160 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 NOX1Q9Y5S8 564 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 RGPD3A6NKT7 1758 aaPredicted RBP12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 RGPD4Q7Z3J3 1758 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 NDUFS4O43181 175 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 B4GALT3O60512 393 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 GIPRP48546 466 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 AP3S2P59780 193 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ILKQ13418 452 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 LY6G5CQ5SRR4 150 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 SLC35F1Q5T1Q4 408 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ANKRD54Q6NXT1 300 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 CD300LGQ6UXG3 332 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 RSPO2Q6UXX9 243 aaPredicted RBP12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 SLITRK4Q8IW52 837 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 FOXJ1Q92949 421 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 NARS2Q96I59 477 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF354BQ96LW1 612 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 C12orf66Q96MD2 445 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 MCHR1Q99705 422 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 PPIL3Q9H2H8 161 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 TTYH1Q9H313 450 aaPredicted RBP12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 TMEM27Q9HBJ8 222 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 ACER3Q9NUN7 267 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 SNX11Q9Y5W9 270 aa12.11□□□□□ -0.47
DNMT3A-202ENST00000321117 NINQ8N4C6 2090 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 HYKKA2RU49 373 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 DUXAA6NLW8 204 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 J3QLW9 94 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 C1SP09871 688 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 HPGDP15428 266 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF19P17023 458 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 PTGS2P35354 604 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 CAV3P56539 151 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 TEKQ02763 1124 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 HSF2Q03933 536 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 GBX1Q14549 363 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 FAM214AQ32MH5 1076 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF805Q5CZA5 627 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms