RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 C6orf132Q5T0Z8 1188 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 BICRALQ6AI39 1079 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 SEC61A2Q9H9S3 476 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 ALKBH4Q9NXW9 302 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 INTS6Q9UL03 887 aaKnown RBP15.69■□□□□ 0.1
CLIP4-201ENST00000320081 TBC1D24Q9ULP9 559 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 HCFC2Q9Y5Z7 792 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 ANKRD33BA6NCL7 494 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 ALPLP05186 524 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 MPC1LP0DKB6 136 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 ITGA3P26006 1051 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 SHC2P98077 582 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 CST6Q15828 149 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 SOWAHCQ53LP3 525 aaPredicted RBP15.69■□□□□ 0.1
CLIP4-201ENST00000320081 COQ5Q5HYK3 327 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 CAMKVQ8NCB2 501 aa15.69■□□□□ 0.1
CLIP4-201ENST00000320081 RNASE11Q8TAA1 199 aaKnown RBP15.69■□□□□ 0.1
CLIP4-201ENST00000320081 TP63Q9H3D4 680 aaPredicted RBP15.69■□□□□ 0.1
CLIP4-201ENST00000320081 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.68■□□□□ 0.1
CLIP4-201ENST00000320081 H3BQ06 376 aaPredicted RBP15.68■□□□□ 0.1
CLIP4-201ENST00000320081 GSRP00390 522 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 C1SP09871 688 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 MAGEA8P43361 318 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 CLCN2P51788 898 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 WDR5P61964 334 aaKnown RBP15.68■□□□□ 0.1
CLIP4-201ENST00000320081 TRAM2Q15035 370 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 PLBD1Q6P4A8 553 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 ZNF548Q8NEK5 533 aaPredicted RBP15.68■□□□□ 0.1
CLIP4-201ENST00000320081 OR52P1PQ8NH57 321 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 BBS10Q8TAM1 723 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 LMX1AQ8TE12 382 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 RLN3Q8WXF3 142 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 SLC22A18Q96BI1 424 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 ERMAPQ96PL5 475 aaPredicted RBP15.68■□□□□ 0.1
CLIP4-201ENST00000320081 SLC22A4Q9H015 551 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 NECTIN3Q9NQS3 549 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 HEBP1Q9NRV9 189 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 USP36Q9P275 1121 aaKnown RBP15.68■□□□□ 0.1
CLIP4-201ENST00000320081 EXTL2Q9UBQ6 330 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 ENPP4Q9Y6X5 453 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 KIAA1551Q9HCM1 1747 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 BCORQ6W2J9 1755 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 HLA-DPB1P04440 258 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 FADDQ13158 208 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 ITPRIPL2Q3MIP1 535 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 RNF111Q6ZNA4 994 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 BCL7CQ8WUZ0 217 aaPredicted RBP15.68■□□□□ 0.1
CLIP4-201ENST00000320081 TRIM2Q9C040 744 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 SPTAN1Q13813 2472 aaKnown RBP15.68■□□□□ 0.1
CLIP4-201ENST00000320081 LDB3O75112 727 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 ADH7P40394 386 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 NR4A2P43354 598 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 GSTM4Q03013 218 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 PTGES3Q15185 160 aaKnown RBP15.68■□□□□ 0.1
CLIP4-201ENST00000320081 FAM214AQ32MH5 1076 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 TMED4Q7Z7H5 227 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 TMC8Q8IU68 726 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 OR52N2Q8NGI0 321 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 OR9A2Q8NGT5 310 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 SMARCD2Q92925 531 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 CRELD1Q96HD1 420 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 ZNF300Q96RE9 604 aaPredicted RBP15.68■□□□□ 0.1
CLIP4-201ENST00000320081 MGAT4BQ9UQ53 548 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 MAU2Q9Y6X3 613 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 TMEM150CB9EJG8 249 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 WWP2O00308 870 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 IFNA6P05013 189 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 HRH2P25021 359 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 SELENOWP63302 87 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 ATXN7L3Q14CW9 347 aaPredicted RBP15.68■□□□□ 0.1
CLIP4-201ENST00000320081 PON3Q15166 354 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 LRIT3Q3SXY7 679 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 ZNF627Q7L945 461 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 OR8J1Q8NGP2 316 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 NEK7Q8TDX7 302 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 ADAD1Q96M93 576 aaKnown RBP15.68■□□□□ 0.1
CLIP4-201ENST00000320081 NLKQ9UBE8 527 aa15.68■□□□□ 0.1
CLIP4-201ENST00000320081 CNOT11Q9UKZ1 510 aaKnown RBP15.68■□□□□ 0.1
CLIP4-201ENST00000320081 IRGMA1A4Y4 181 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 RFXAPO00287 272 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 CRYZQ08257 329 aaKnown RBP15.67■□□□□ 0.1
CLIP4-201ENST00000320081 RUNX3Q13761 415 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 FBXO43Q4G163 708 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 COX20Q5RI15 118 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 PELI3Q8N2H9 469 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 SLC37A3Q8NCC5 494 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 COQ8BQ96D53 544 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 DGAT2Q96PD7 388 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 ENAMQ9NRM1 1142 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 FUOMA2VDF0 154 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 TAPBPO15533 448 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 RNGTTO60942 597 aaKnown RBP15.67■□□□□ 0.1
CLIP4-201ENST00000320081 RETP07949 1114 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 ZNF3P17036 446 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 BMPR1AP36894 532 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 STARP49675 285 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 AKR1D1P51857 326 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 MMP21Q8N119 569 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 TEX26Q8N6G2 289 aa15.67■□□□□ 0.1
CLIP4-201ENST00000320081 B3GNT7Q8NFL0 401 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms