RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 MYNNQ9NPC7 610 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 ADAP2Q9NPF8 381 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 MED4Q9NPJ6 270 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 SIRT5Q9NXA8 310 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 PLA2G3Q9NZ20 509 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 LUZP4Q9P127 313 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 VTI1BQ9UEU0 232 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 ZNF223Q9UK11 482 aaPredicted RBP7.33□□□□□ -1.24
CDC42-201ENST00000315554 UTS2RQ9UKP6 389 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 CLCA3PQ9Y6N3 262 aa7.33□□□□□ -1.24
CDC42-201ENST00000315554 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.32□□□□□ -1.24
CDC42-201ENST00000315554 TCP11X1B4DZS4 312 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 NPIPB8E9PQR5 432 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 PCDH17O14917 1159 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 ATXN7O15265 892 aaPredicted RBP7.32□□□□□ -1.24
CDC42-201ENST00000315554 HDAC3O15379 428 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 ICMTO60725 284 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 DIAPH2O60879 1101 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 NME6O75414 186 aaPredicted RBP7.32□□□□□ -1.24
CDC42-201ENST00000315554 CEACAM4O75871 244 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 SNUPNO95149 360 aaKnown RBP7.32□□□□□ -1.24
CDC42-201ENST00000315554 DDAH2O95865 285 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 G6PDP11413 515 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 DRD2P14416 443 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 PORP16435 677 aaPredicted RBP7.32□□□□□ -1.24
CDC42-201ENST00000315554 CD97P48960 835 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 DIO3P55073 304 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 ERVK-8P63133 956 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 HEPACAMQ14CZ8 416 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 EXT1Q16394 746 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 SOWAHCQ53LP3 525 aaPredicted RBP7.32□□□□□ -1.24
CDC42-201ENST00000315554 ZNF385BQ569K4 471 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 FAM111BQ6SJ93 734 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 ASB18Q6ZVZ8 466 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 CCDC116Q8IYX3 515 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 ST13P4Q8IZP2 240 aaPredicted RBP7.32□□□□□ -1.24
CDC42-201ENST00000315554 KRTCAP2Q8N6L1 136 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 APCDD1LQ8NCL9 501 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 SIMC1Q8NDZ2 872 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 B3GNT7Q8NFL0 401 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 FAM76AQ8TAV0 307 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.32□□□□□ -1.24
CDC42-201ENST00000315554 M1APQ8TC57 530 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 SLC2A12Q8TD20 617 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 ERP27Q96DN0 273 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 RBM18Q96H35 190 aaKnown RBP7.32□□□□□ -1.24
CDC42-201ENST00000315554 MAGEB18Q96M61 343 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 C7orf26Q96N11 449 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 NPAS2Q99743 824 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 CCT7Q99832 543 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 YY1AP1Q9H869 796 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 MEAF6Q9HAF1 191 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 MIEF1Q9NQG6 463 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 ERVK-19Q9WJR5 959 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 CSAG2Q9Y5P2 127 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 USH1CQ9Y6N9 552 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 ZNF780BQ9Y6R6 833 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 TNRC6AQ8NDV7 1962 aaKnown RBP7.32□□□□□ -1.24
CDC42-201ENST00000315554 LOC400499M0QZD8 3231 aa7.32□□□□□ -1.24
CDC42-201ENST00000315554 C9JVG2 144 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 ZNF195O14628 629 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 ALDOCP09972 364 aaKnown RBP7.31□□□□□ -1.24
CDC42-201ENST00000315554 SLC35E2P0CK97 266 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 ICAM2P13598 275 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 COX7A2P14406 83 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 LBPP18428 481 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 CSNK2A2P19784 350 aaPredicted RBP7.31□□□□□ -1.24
CDC42-201ENST00000315554 DDCP20711 480 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 SSTR4P31391 388 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 GPR143P51810 404 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 MRPS35P82673 323 aaKnown RBP7.31□□□□□ -1.24
CDC42-201ENST00000315554 NFATC3Q12968 1075 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 EXOSC7Q15024 291 aaKnown RBP7.31□□□□□ -1.24
CDC42-201ENST00000315554 SWI5Q1ZZU3 235 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 LACTB2Q53H82 288 aaPredicted RBP7.31□□□□□ -1.24
CDC42-201ENST00000315554 AGAP7PQ5VUJ5 663 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 TMEM198Q66K66 360 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 GALNT12Q8IXK2 581 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 OR7A2PQ8NGA2 310 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 OR9A2Q8NGT5 310 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 OR14A16Q8NHC5 309 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 PIWIL2Q8TC59 973 aaKnown RBP7.31□□□□□ -1.24
CDC42-201ENST00000315554 ELP5Q8TE02 316 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 ZNF721Q8TF20 911 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 KAT2AQ92830 837 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 DAZLQ92904 295 aaKnown RBP7.31□□□□□ -1.24
CDC42-201ENST00000315554 RIT1Q92963 219 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 CIDECQ96AQ7 238 aaPredicted RBP7.31□□□□□ -1.24
CDC42-201ENST00000315554 PPCDCQ96CD2 204 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 VMP1Q96GC9 406 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 SENP5Q96HI0 755 aaPredicted RBP7.31□□□□□ -1.24
CDC42-201ENST00000315554 MAGED4Q96JG8 741 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 ZNF681Q96N22 645 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 AGAP4Q96P64 663 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 OR52B2Q96RD2 323 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 BBS4Q96RK4 519 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 DEFB126Q9BYW3 111 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 ADNPQ9H2P0 1102 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 CDCP1Q9H5V8 836 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 CXorf21Q9HAI6 301 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms