RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SLC37A1P57057 533 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 SERTAD2Q14140 314 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 PTGR1Q14914 329 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 MEP1AQ16819 746 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 PRICKLE4Q2TBC4 344 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 EIF2S3LQ2VIR3 472 aaKnown RBP11.16□□□□□ -0.62
SCFD1-201ENST00000311943 XKR7Q5GH72 579 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 GALNT18Q6P9A2 607 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 HSDL2Q6YN16 418 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 LSRQ86X29 649 aaPredicted RBP11.16□□□□□ -0.62
SCFD1-201ENST00000311943 SLC5A8Q8N695 610 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 OR5M3Q8NGP4 307 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 VPS50Q96JG6 964 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 RASL10BQ96S79 203 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 NUF2Q9BZD4 464 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 MAT2BQ9NZL9 334 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 EHD3Q9NZN3 535 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 MYOTQ9UBF9 498 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 BAHCC1Q9P281 2608 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 UBR5O95071 2799 aaPredicted RBP11.16□□□□□ -0.62
SCFD1-201ENST00000311943 SERTM1A2A2V5 107 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 C9JVG2 144 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 ZWINTO95229 277 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 SLC35E2P0CK97 266 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 NEFHP12036 1026 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 FOXK1P85037 733 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 PLIN5Q00G26 463 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 TLR1Q15399 786 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 MAPKAPK3Q16644 382 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 SPIN4Q56A73 249 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 HHATQ5VTY9 493 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 FAM71E1Q6IPT2 247 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.16□□□□□ -0.62
SCFD1-201ENST00000311943 TMEM132CQ8N3T6 1108 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 CPSF7Q8N684 471 aaKnown RBP11.16□□□□□ -0.62
SCFD1-201ENST00000311943 KRTCAP2Q8N6L1 136 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 ZNF615Q8N8J6 731 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 MORN4Q8NDC4 146 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 OR14A16Q8NHC5 309 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 DAZLQ92904 295 aaKnown RBP11.16□□□□□ -0.62
SCFD1-201ENST00000311943 MAGED4Q96JG8 741 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 ZNF354BQ96LW1 612 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 WDR41Q9HAD4 459 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 C1orf109Q9NX04 203 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 PCDHGB7Q9Y5F8 929 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 ACTL7BQ9Y614 415 aa11.16□□□□□ -0.62
SCFD1-201ENST00000311943 C17orf51A8MQB3 221 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 PCDH17O14917 1159 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 ZFAND5O76080 213 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 NADKO95544 446 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-201ENST00000311943 CBX7O95931 251 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 C1QCP02747 245 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 BCKDHAP12694 445 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 PORP16435 677 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-201ENST00000311943 ZNF763Q0D2J5 394 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 STX3Q13277 289 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 ZNF766Q5HY98 468 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 C6orf136Q5SQH8 315 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 BICRALQ6AI39 1079 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 LYPD8Q6UX82 237 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 ZNF551Q7Z340 670 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-201ENST00000311943 MAVSQ7Z434 540 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 GALNT12Q8IXK2 581 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 OTUB1Q96FW1 271 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-201ENST00000311943 FBXL20Q96IG2 436 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 UTP23Q9BRU9 249 aaKnown RBP11.15□□□□□ -0.62
SCFD1-201ENST00000311943 TRMOQ9BU70 441 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 WDR55Q9H6Y2 383 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-201ENST00000311943 SLCO1B3Q9NPD5 702 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 PFDN4Q9NQP4 134 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 STK38LQ9Y2H1 464 aa11.15□□□□□ -0.62
SCFD1-201ENST00000311943 COPG1Q9Y678 874 aaKnown RBP11.15□□□□□ -0.62
SCFD1-201ENST00000311943 GOLGA8QA0A0J9YX86 632 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 GOLGA8OA6NCC3 632 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 GOLGA8NF8WBI6 632 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 DIO3P55073 304 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 HSF1Q00613 529 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 EBPQ15125 230 aaKnown RBP11.14□□□□□ -0.63
SCFD1-201ENST00000311943 OR7G2Q8NG99 324 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 C16orf52Q8NHV5 167 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 TM9SF4Q92544 642 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 TUBGCP3Q96CW5 907 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 ATP6V1G3Q96LB4 118 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 SH3GL2Q99962 352 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 NMRK1Q9NWW6 199 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 HRH3Q9Y5N1 445 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 RP1L1Q8IWN7 2480 aaPredicted RBP11.14□□□□□ -0.63
SCFD1-201ENST00000311943 SLC28A1O00337 649 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 BIRC5O15392 142 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 RGS14O43566 566 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 SLC25A12O75746 678 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 DDCP20711 480 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 CORO7P57737 925 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 TERF2Q15554 542 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 C10orf62Q5T681 223 aaPredicted RBP11.14□□□□□ -0.63
SCFD1-201ENST00000311943 PRAMEF20Q5VT98 475 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 IL23RQ5VWK5 629 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 LIX1Q8N485 282 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 TMEM156Q8N614 296 aa11.14□□□□□ -0.63
SCFD1-201ENST00000311943 OR7A2PQ8NGA2 310 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms