RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 CHST8Q9H2A9 424 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 IMP3Q9NV31 184 aaKnown RBP12.88□□□□□ -0.35
NPAS4-201ENST00000311034 SEC14L3Q9UDX4 400 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 ZNF222Q9UK12 451 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 HYKKA2RU49 373 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 SGTAO43765 313 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 PRKYO43930 277 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 ADAMTS4O75173 837 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 PRKAR1AP10644 381 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 OSMP13725 252 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 RHCEP18577 417 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 CHRNEQ04844 493 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 GINS1Q14691 196 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 YIF1BQ5BJH7 314 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 WDR45BQ5MNZ6 344 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 SPATA6Q9NWH7 488 aaPredicted RBP12.88□□□□□ -0.35
NPAS4-201ENST00000311034 GULP1Q9UBP9 304 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 TRAPPC4Q9Y296 219 aa12.88□□□□□ -0.35
NPAS4-201ENST00000311034 SCN3AQ9NY46 2000 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 C2orf92A0A1B0GVN3 265 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 ZNF780AO75290 641 aaPredicted RBP12.87□□□□□ -0.35
NPAS4-201ENST00000311034 IGHA2P01877 340 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 H1F0P07305 194 aaKnown RBP12.87□□□□□ -0.35
NPAS4-201ENST00000311034 NR2F1P10589 423 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 PSMB5P28074 263 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 TLE2Q04725 743 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 CSTF1Q05048 431 aaKnown RBP12.87□□□□□ -0.35
NPAS4-201ENST00000311034 RBBP4Q09028 425 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 HYAL4Q2M3T9 481 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 SPIN4Q56A73 249 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 SLC35F1Q5T1Q4 408 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 XKRXQ6PP77 449 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 NPAS4Q8IUM7 802 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 PEX5LQ8IYB4 626 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 SLC37A3Q8NCC5 494 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 RASSF5Q8WWW0 418 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 F2RL3Q96RI0 385 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 TAPBPLQ9BX59 468 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 KLF16Q9BXK1 252 aaPredicted RBP12.87□□□□□ -0.35
NPAS4-201ENST00000311034 FBXW2Q9UKT8 454 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 SH2B3Q9UQQ2 575 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 SPEF1Q9Y4P9 236 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 PLXNA4Q9HCM2 1894 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 FFAR1O14842 300 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 PLA2G10O15496 165 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 CXCL14O95715 111 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 C1SP09871 688 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 RHAGQ02094 409 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 KIAA1161Q6NSJ0 714 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 MZT2BQ6NZ67 158 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 SLC38A6Q8IZM9 456 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 CREB3L4Q8TEY5 395 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 SLC25A46Q96AG3 418 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 CCDC120Q96HB5 630 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 TMEM19Q96HH6 336 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 NKIRAS2Q9NYR9 191 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 TMPRSS11EQ9UL52 423 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 EXO1Q9UQ84 846 aaKnown RBP12.87□□□□□ -0.35
NPAS4-201ENST00000311034 HCFC2Q9Y5Z7 792 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 TRAV6A0A075B6T7 132 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 CD8B2A6NJW9 211 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 BTN3A3O00478 584 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 RNASET2O00584 256 aaKnown RBP12.87□□□□□ -0.35
NPAS4-201ENST00000311034 SLC30A4O14863 429 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 TEX28O15482 410 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 C8AP07357 584 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 CD8BP10966 210 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 PRPH2P23942 346 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 SOX18P35713 384 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 OR3A3P47888 321 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 MVDP53602 400 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 ST8SIA6P61647 398 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 ID2Q02363 134 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 PUM1Q14671 1186 aaKnown RBP eCLIP12.87□□□□□ -0.35
NPAS4-201ENST00000311034 ZNF630Q2M218 657 aaPredicted RBP12.87□□□□□ -0.35
NPAS4-201ENST00000311034 METTL2BQ6P1Q9 378 aaKnown RBP12.87□□□□□ -0.35
NPAS4-201ENST00000311034 KRT74Q7RTS7 529 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 IQCHQ86VS3 1027 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 CCDC28AQ8IWP9 274 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 C12orf76Q8N812 135 aaPredicted RBP12.87□□□□□ -0.35
NPAS4-201ENST00000311034 BBS10Q8TAM1 723 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 WFDC6Q9BQY6 131 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 C1GALT1Q9NS00 363 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 CLCA2Q9UQC9 943 aa12.87□□□□□ -0.35
NPAS4-201ENST00000311034 PIPSLA2A3N6 862 aa12.86□□□□□ -0.35
NPAS4-201ENST00000311034 TMEM189-UBE2V1I3L0A0 370 aa12.86□□□□□ -0.35
NPAS4-201ENST00000311034 POLR1CO15160 346 aaPredicted RBP12.86□□□□□ -0.35
NPAS4-201ENST00000311034 HMGA1P17096 107 aaKnown RBP12.86□□□□□ -0.35
NPAS4-201ENST00000311034 RPS5P46782 204 aaKnown RBP12.86□□□□□ -0.35
NPAS4-201ENST00000311034 SLC9A3P48764 834 aa12.86□□□□□ -0.35
NPAS4-201ENST00000311034 SPINT3P49223 89 aa12.86□□□□□ -0.35
NPAS4-201ENST00000311034 ASAH1Q13510 395 aa12.86□□□□□ -0.35
NPAS4-201ENST00000311034 KLHL12Q53G59 568 aa12.86□□□□□ -0.35
NPAS4-201ENST00000311034 HIST2H2AA3Q6FI13 130 aa12.86□□□□□ -0.35
NPAS4-201ENST00000311034 GRHL2Q6ISB3 625 aa12.86□□□□□ -0.35
NPAS4-201ENST00000311034 REEP3Q6NUK4 255 aa12.86□□□□□ -0.35
NPAS4-201ENST00000311034 OR8H3Q8N146 312 aa12.86□□□□□ -0.35
NPAS4-201ENST00000311034 HORMAD2Q8N7B1 307 aa12.86□□□□□ -0.35
NPAS4-201ENST00000311034 C16orf78Q8WTQ4 265 aa12.86□□□□□ -0.35
NPAS4-201ENST00000311034 REPS1Q96D71 796 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms